RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 KLHDC9Q8NEP7 349 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 ANKRD20A12PQ8NF67 263 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 SCFD2Q8WU76 684 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 CRYGNQ8WXF5 182 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 CUL5Q93034 780 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 INPP4AQ96PE3 977 aaPredicted RBP8.95□□□□□ -0.98
RTF1-205ENST00000558298 SEZ6LQ9BYH1 1024 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 VAT1LQ9HCJ6 419 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 RNF216Q9NWF9 866 aaPredicted RBP8.95□□□□□ -0.98
RTF1-205ENST00000558298 ADAM21Q9UKJ8 722 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 MOXD2PA6NHM9 499 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 PPFIA4O75335 1185 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 CFBP00751 764 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 NR3C2P08235 984 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 HOXD8P13378 290 aaPredicted RBP8.94□□□□□ -0.98
RTF1-205ENST00000558298 CALML3P27482 149 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 GNA11P29992 359 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 TXLNAP40222 546 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 FAM160A1Q05DH4 1040 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 PGM5Q15124 567 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 ME3Q16798 604 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 CCDC144BQ3MJ40 725 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 PCNX4Q63HM2 1172 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 CCDC62Q6P9F0 684 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 ARRDC4Q8NCT1 418 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 LEO1Q8WVC0 666 aaPredicted RBP8.94□□□□□ -0.98
RTF1-205ENST00000558298 LENG1Q96BZ8 264 aaPredicted RBP8.94□□□□□ -0.98
RTF1-205ENST00000558298 GDF15Q99988 308 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 PSTPIP2Q9H939 334 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 PHF24Q9UPV7 400 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 V9GY48 417 aaPredicted RBP8.94□□□□□ -0.98
RTF1-205ENST00000558298 SYNRGQ9UMZ2 1314 aa8.94□□□□□ -0.98
RTF1-205ENST00000558298 TRIOBPQ9H2D6 2365 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 SZT2Q5T011 3432 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 M0R2N6 131 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 CPLX1O14810 134 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 MAFGO15525 162 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 SLC34A2O95436 690 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 CNGA1P29973 690 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 SREBF1P36956 1147 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 LMAN1P49257 510 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 ADCY7P51828 1080 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 NAPAP54920 295 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 SATB1Q01826 763 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 AKAP17AQ02040 695 aaKnown RBP8.93□□□□□ -0.98
RTF1-205ENST00000558298 PDE4DQ08499 809 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 STXBP2Q15833 593 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 ARHGEF16Q5VV41 709 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 ANO1Q5XXA6 986 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 GBP6Q6ZN66 633 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 NIPA1Q7RTP0 329 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 HEATR3Q7Z4Q2 680 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 RNF180Q86T96 592 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 CMTR1Q8N1G2 835 aaKnown RBP8.93□□□□□ -0.98
RTF1-205ENST00000558298 SMARCC2Q8TAQ2 1214 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 WASF1Q92558 559 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 TBC1D5Q92609 795 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 RUBCNQ92622 972 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 SECISBP2LQ93073 1101 aaKnown RBP8.93□□□□□ -0.98
RTF1-205ENST00000558298 CDHR1Q96JP9 859 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 PURBQ96QR8 312 aaKnown RBP8.93□□□□□ -0.98
RTF1-205ENST00000558298 TAAR1Q96RJ0 339 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 SENP7Q9BQF6 1050 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 DNAJC25Q9H1X3 360 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 EHMT1Q9H9B1 1298 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 XPNPEP3Q9NQH7 507 aa8.93□□□□□ -0.98
RTF1-205ENST00000558298 COLQQ9Y215 455 aaPredicted RBP8.93□□□□□ -0.98
RTF1-205ENST00000558298 A0A1W2PQ27 194 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 A0A1W2PQ64 194 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 A0A1W2PQD8 194 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 MYADML2A6NDP7 307 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 SPDYE3A6NKU9 549 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 MAP2K7O14733 419 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 EVI5O60447 810 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 RGS20O76081 388 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 CTDNEP1O95476 244 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 CYP3A4P08684 503 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 CCND2P30279 289 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 TNFAIP2Q03169 654 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 SSRP1Q08945 709 aaKnown RBP8.92□□□□□ -0.98
RTF1-205ENST00000558298 ST3GAL1Q11201 340 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 TTLL4Q14679 1199 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 NPY5RQ15761 445 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 GNPTABQ3T906 1256 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 HABP4Q5JVS0 413 aaKnown RBP8.92□□□□□ -0.98
RTF1-205ENST00000558298 GJC2Q5T442 439 aaPredicted RBP8.92□□□□□ -0.98
RTF1-205ENST00000558298 MOXD1Q6UVY6 613 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 TLK2Q86UE8 772 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 RAB11FIP4Q86YS3 637 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 CCDC50Q8IVM0 306 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 FBXO16Q8IX29 292 aaPredicted RBP8.92□□□□□ -0.98
RTF1-205ENST00000558298 PCSK9Q8NBP7 692 aaKnown RBP8.92□□□□□ -0.98
RTF1-205ENST00000558298 NSUN7Q8NE18 718 aaKnown RBP8.92□□□□□ -0.98
RTF1-205ENST00000558298 DPF3Q92784 378 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 GPKOWQ92917 476 aaPredicted RBP eCLIP8.92□□□□□ -0.98
RTF1-205ENST00000558298 PHKBQ93100 1093 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 SMARCE1Q969G3 411 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 GPRASP2Q96D09 838 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 RPGRIP1Q96KN7 1286 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 NAA15Q9BXJ9 866 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms