RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 SYNGAP1Q96PV0 1343 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 LCE2BO14633 110 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 SOX11P35716 441 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 ARHGAP4P98171 946 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 ACVR2BQ13705 512 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 SEPT14Q6ZU15 432 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 FERMT3Q86UX7 667 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 VSIG10LQ86VR7 867 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 TEX2Q8IWB9 1127 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 MSL3Q8N5Y2 521 aaKnown RBP13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 ALG2Q9H553 416 aa13.67□□□□□ -0.22
HMGB1P8-201ENST00000558211 STX6O43752 255 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 EIF3JO75822 258 aaKnown RBP13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 EDNRBP24530 442 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 CCND3P30281 292 aaPredicted RBP13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 SREBF1P36956 1147 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 MRPS9P82933 396 aaKnown RBP13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 PCNX4Q63HM2 1172 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 TRPV1Q8NER1 839 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 TNFRSF25Q93038 417 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 PDGFCQ9NRA1 345 aa13.66□□□□□ -0.22
HMGB1P8-201ENST00000558211 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 KIAA1217Q5T5P2 1943 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 SMCPP49901 116 aaPredicted RBP13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 MTFR1Q15390 333 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 LETM2Q2VYF4 491 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 COL13A1Q5TAT6 717 aaPredicted RBP13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 ANO1Q5XXA6 986 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 NOSTRINQ8IVI9 506 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 CYP2W1Q8TAV3 490 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
HMGB1P8-201ENST00000558211 SORBS3O60504 671 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 IGHA2P01877 340 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 ZNF865P0CJ78 1059 aaPredicted RBP13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 CYBAP13498 195 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 ADCYAP1R1P41586 468 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 CCDC144BQ3MJ40 725 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 TAPT1Q6NXT6 567 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 XRRA1Q6P2D8 792 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 NEK8Q86SG6 692 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 CCDC116Q8IYX3 515 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 WDR11Q9BZH6 1224 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 KATNBL1Q9H079 304 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
HMGB1P8-201ENST00000558211 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 EDIL3O43854 480 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 TDP2O95551 362 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 CYP3A4P08684 503 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 ITGB5P18084 799 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 PTGS1P23219 599 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 USP11P51784 963 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 PKP1Q13835 747 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 PRR16Q569H4 304 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 TMEM63BQ5T3F8 832 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 PLA2G4DQ86XP0 818 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 MXRA8Q9BRK3 442 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 RNF208Q9H0X6 261 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 JADE2Q9NQC1 790 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 FAM184BQ9ULE4 1060 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 UBIAD1Q9Y5Z9 338 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 MRVI1Q9Y6F6 885 aa13.63□□□□□ -0.23
HMGB1P8-201ENST00000558211 FAM86B1E9PN63 330 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 STAM2O75886 525 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 FAM86B2P0C5J1 330 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 ARP10275 920 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 TXNP10599 105 aaKnown RBP13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 CCL5P13501 91 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 TIMP2P16035 220 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 TNFAIP2Q03169 654 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 MTMR1Q13613 665 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 TTLL4Q14679 1199 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 ZNF174Q15697 407 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 LY6KQ17RY6 165 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 FOXD4L6Q3SYB3 417 aaPredicted RBP13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 CEP55Q53EZ4 464 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 GJC2Q5T442 439 aaPredicted RBP13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 MAP3K21Q5TCX8 1036 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 FOXD4L3Q6VB84 417 aaPredicted RBP13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 Q6ZNB5 142 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 PHTF2Q8N3S3 785 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 SCFD2Q8WU76 684 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 CRYGNQ8WXF5 182 aa13.62□□□□□ -0.23
HMGB1P8-201ENST00000558211 COPS5Q92905 334 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms