RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 SWSAP1Q6NVH7 229 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 KCNG4Q8TDN1 519 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 ATP6V0A1Q93050 837 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 PAWRQ96IZ0 340 aaKnown RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 AK8Q96MA6 479 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 SCAND2PQ9GZW5 306 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 TUT1Q9H6E5 874 aaKnown RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 C11orf49Q9H6J7 331 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 GABBR1Q9UBS5 961 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 LRWD1Q9UFC0 647 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 RCOR1Q9UKL0 485 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 TELO2Q9Y4R8 837 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 SRPRBQ9Y5M8 271 aaKnown RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 MAFBQ9Y5Q3 323 aaPredicted RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 EVPLQ92817 2033 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 A0A0U1RQG5 324 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-204ENST00000558172 A0A1W2PQ45 241 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-204ENST00000558172 A0A1W2PQY0 241 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 VWA3AA6NCI4 1184 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 HAS3O00219 553 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 EML1O00423 815 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 SLC26A4O43511 780 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 ZNF286BP0CG31 522 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 MUTP22033 750 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 QARSP47897 775 aaKnown RBP11.76□□□□□ -0.53
LRRC28-204ENST00000558172 PSEN2P49810 448 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 PSMC5P62195 406 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-204ENST00000558172 MFSD10Q14728 455 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 IL17AQ16552 155 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 HAUS3Q68CZ6 603 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 CCDC60Q8IWA6 550 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-204ENST00000558172 KAT2BQ92831 832 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 PCYT2Q99447 389 aa11.76□□□□□ -0.53
LRRC28-204ENST00000558172 EIF2AK1Q9BQI3 630 aaKnown RBP11.76□□□□□ -0.53
LRRC28-204ENST00000558172 FTOQ9C0B1 505 aaKnown RBP eCLIP11.76□□□□□ -0.53
LRRC28-204ENST00000558172 POTEMA6NI47 508 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 SLITRK3O94933 977 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 NCLP19338 710 aaKnown RBP11.75□□□□□ -0.53
LRRC28-204ENST00000558172 RPA1P27694 616 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-204ENST00000558172 SOX10P56693 466 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 C1orf53Q5VUE5 145 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 KRT79Q5XKE5 535 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 NFRKBQ6P4R8 1299 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 SLC39A5Q6ZMH5 540 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 KCTD17Q8N5Z5 321 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 KRI1Q8N9T8 703 aaKnown RBP11.75□□□□□ -0.53
LRRC28-204ENST00000558172 FAM167AQ96KS9 214 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 HSD17B14Q9BPX1 270 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-204ENST00000558172 ZSWIM4Q9H7M6 989 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 TUFT1Q9NNX1 390 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 NRBP2Q9NSY0 501 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 FBXO2Q9UK22 296 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-204ENST00000558172 IGSF9BQ9UPX0 1349 aa11.75□□□□□ -0.53
LRRC28-204ENST00000558172 BRCA2P51587 3418 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 ARVCFO00192 962 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 HBP1O60381 514 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 CUTAO60888 179 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 GNAT1P11488 350 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 XRCC6P12956 609 aaKnown RBP eCLIP11.74□□□□□ -0.53
LRRC28-204ENST00000558172 UBA7P41226 1012 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 XKR3Q5GH77 459 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 OTUD6AQ7L8S5 288 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 SESTD1Q86VW0 696 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 TRIM50Q86XT4 487 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 C4orf19Q8IY42 314 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 C7orf31Q8N865 590 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
LRRC28-204ENST00000558172 SLC43A3Q8NBI5 491 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 DIS3LQ8TF46 1054 aaKnown RBP11.74□□□□□ -0.53
LRRC28-204ENST00000558172 ATP8B4Q8TF62 1192 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-204ENST00000558172 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 MROH7Q68CQ1 1323 aa11.74□□□□□ -0.53
LRRC28-204ENST00000558172 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 RRN3P2A6NIE6 340 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 LYPLA2O95372 231 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 OATP04181 439 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 COL1A2P08123 1366 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 ATP4AP20648 1035 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 CCT6AP40227 531 aaKnown RBP11.73□□□□□ -0.53
LRRC28-204ENST00000558172 CDK7P50613 346 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms