RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 FAM109BQ6ICB4 259 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 CCDC62Q6P9F0 684 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 CASC1Q6TDU7 716 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 NFXL1Q6ZNB6 911 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 ZNF365Q70YC5 407 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 C16orf59Q7L2K0 433 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 RAB11FIP4Q86YS3 637 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 ZNF654Q8IZM8 581 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 KCTD15Q96SI1 283 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 IWS1Q96ST2 819 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 ARHGAP9Q9BRR9 750 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 MTG1Q9BT17 334 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 COL25A1Q9BXS0 654 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 MAF1Q9H063 256 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 ALDH8A1Q9H2A2 487 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 HIPK3Q9H422 1215 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 LY9Q9HBG7 655 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 PXMP2Q9NR77 195 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 MYH9P35579 1960 aaKnown RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 EVPLQ92817 2033 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 COL6A3P12111 3177 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 A6NJR5 290 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 FIGNL2A6NMB9 653 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 GCOM1H8Y6P7 765 aaPredicted RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 RNF225M0QZC1 329 aaPredicted RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 SORBS3O60504 671 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 EIF3JO75822 258 aaKnown RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 GH1P01241 217 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 POLR2MP0CAP2 368 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 CYP2C9P11712 490 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 MCM5P33992 734 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 SMAD3P84022 425 aaKnown RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 DHX9Q08211 1270 aaKnown RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 SUZ12Q15022 739 aaKnown RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 NECTIN1Q15223 517 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 BMP2KLQ5H9B9 411 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 FCHSD1Q86WN1 690 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 KCTD17Q8N5Z5 321 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 IL31RAQ8NI17 732 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 CTCFLQ8NI51 663 aaPredicted RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 AFG1LQ8WV93 481 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 GUCD1Q96NT3 240 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 PDCD2LQ9BRP1 358 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 NOC4LQ9BVI4 516 aaKnown RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 SEZ6LQ9BYH1 1024 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 LRRC2Q9BYS8 371 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 TRMT13Q9NUP7 481 aaKnown RBP8.72□□□□□ -1.01
SPG11-205ENST00000558080 FKBPLQ9UIM3 349 aa8.72□□□□□ -1.01
SPG11-205ENST00000558080 NCOR1O75376 2440 aa8.71□□□□□ -1.01
SPG11-205ENST00000558080 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 CCDC69A6NI79 296 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 GRXCR1A8MXD5 290 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 SH2B2O14492 632 aaPredicted RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 KPNA6O60684 536 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 DDAH1O94760 285 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 SUPT20HL2P0C7V6 817 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 RXRAP19793 462 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 GHRHRQ02643 423 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 ARHGAP1Q07960 439 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 TRAF1Q13077 416 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 PGM5Q15124 567 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 VSIG10LQ86VR7 867 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 DHX37Q8IY37 1157 aaKnown RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 CMTR1Q8N1G2 835 aaKnown RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 TMEM151AQ8N4L1 468 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 SAMD3Q8N6K7 520 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 SLC17A8Q8NDX2 589 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 SCLYQ96I15 445 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 TMEM87BQ96K49 555 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 TTYH1Q9H313 450 aaPredicted RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 SEMA6BQ9H3T3 888 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 IL23AQ9NPF7 189 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 MAP3K20Q9NYL2 800 aaKnown RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 DDX41Q9UJV9 622 aaKnown RBP8.71□□□□□ -1.02
SPG11-205ENST00000558080 STXBP5LQ9Y2K9 1186 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 MRVI1Q9Y6F6 885 aa8.71□□□□□ -1.02
SPG11-205ENST00000558080 MICAL3Q7RTP6 2002 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 hCG_1642624A0A1W2PR95 340 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 PLEKHA8P1O95397 391 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 FGBP02675 491 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 MMP3P08254 477 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 CASTP20810 708 aaKnown RBP8.7□□□□□ -1.02
SPG11-205ENST00000558080 CCND2P30279 289 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 KIF5BP33176 963 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 RNFT1Q5M7Z0 435 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 PSRC1Q6PGN9 363 aaPredicted RBP8.7□□□□□ -1.02
SPG11-205ENST00000558080 OTOP2Q7RTS6 562 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 DEFB128Q7Z7B8 93 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 TMTC2Q8N394 836 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 SRBD1Q8N5C6 995 aaKnown RBP8.7□□□□□ -1.02
SPG11-205ENST00000558080 RRP36Q96EU6 259 aaKnown RBP8.7□□□□□ -1.02
SPG11-205ENST00000558080 MAP3K14Q99558 947 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 CDX2Q99626 313 aaPredicted RBP8.7□□□□□ -1.02
SPG11-205ENST00000558080 ALG1Q9BT22 464 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 MTA3Q9BTC8 594 aa8.7□□□□□ -1.02
SPG11-205ENST00000558080 WNT8AQ9H1J5 351 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms