RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 RAVER2Q9HCJ3 691 aaKnown RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 HOOK1Q9UJC3 728 aaKnown RBP8.3□□□□□ -1.08
SPG11-204ENST00000557866 CCPG1Q9ULG6 757 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 AFG3L2Q9Y4W6 797 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 SNCAIPQ9Y6H5 919 aa8.3□□□□□ -1.08
SPG11-204ENST00000557866 GLTPD2A6NH11 291 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 GCOM1H8Y6P7 765 aaPredicted RBP8.29□□□□□ -1.08
SPG11-204ENST00000557866 NFIBO00712 420 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 FLOT1O75955 427 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 SMC2O95347 1197 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 CFBP00751 764 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 POLR2MP0CAP2 368 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 EPHX2P34913 555 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 TXLNAP40222 546 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 STAT6P42226 847 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 HSD17B4P51659 736 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 ZNF75DP51815 510 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 HMGCS2P54868 508 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 GHRHRQ02643 423 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 TRAF1Q13077 416 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 PDIA5Q14554 519 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 ZRSR1Q15695 479 aaKnown RBP8.29□□□□□ -1.08
SPG11-204ENST00000557866 Q4G0T1 1027 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 TMEM119Q4V9L6 283 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 MUM1L1Q5H9M0 696 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 SARM1Q6SZW1 724 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 USP50Q70EL3 339 aaPredicted RBP8.29□□□□□ -1.08
SPG11-204ENST00000557866 MOB2Q70IA6 237 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 KRT26Q7Z3Y9 468 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 FCHSD1Q86WN1 690 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 PLA2G4DQ86XP0 818 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 TEX2Q8IWB9 1127 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 TRIML1Q8N9V2 468 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 ATG4CQ96DT6 458 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 NAP1L4Q99733 375 aaKnown RBP8.29□□□□□ -1.08
SPG11-204ENST00000557866 NAT10Q9H0A0 1025 aaKnown RBP8.29□□□□□ -1.08
SPG11-204ENST00000557866 TAF1DQ9H5J8 278 aaPredicted RBP8.29□□□□□ -1.08
SPG11-204ENST00000557866 TTC12Q9H892 705 aaPredicted RBP8.29□□□□□ -1.08
SPG11-204ENST00000557866 AS3MTQ9HBK9 375 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 BLOC1S4Q9NUP1 217 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 KBTBD4Q9NVX7 518 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 COL20A1Q9P218 1284 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 ADAMTS5Q9UNA0 930 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 SBF1O95248 1867 aa8.29□□□□□ -1.08
SPG11-204ENST00000557866 IGLV3-22A0A075B6J6 115 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 BECN2A8MW95 431 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 C19orf81C9J6K1 198 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 GOLGA6L19H0YKK7 550 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 VWA5AO00534 786 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 IKBKBO14920 756 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 MSH4O15457 936 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 KLRC4O43908 158 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 GPR37L1O60883 481 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 STAT3P40763 770 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 RNF144AP50876 292 aaPredicted RBP8.28□□□□□ -1.08
SPG11-204ENST00000557866 ERVK-9P63128 1117 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 SPIRE1Q08AE8 756 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 PRR16Q569H4 304 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 CATSPERGQ6ZRH7 1159 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 KCNK18Q7Z418 384 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 SMYD4Q8IYR2 804 aaPredicted RBP8.28□□□□□ -1.08
SPG11-204ENST00000557866 CPXCR1Q8N123 301 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 MLKLQ8NB16 471 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 CDCA5Q96FF9 252 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 GSDMAQ96QA5 445 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 LRWD1Q9UFC0 647 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 CCDC39Q9UFE4 941 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 RIPK3Q9Y572 518 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 DICER1Q9UPY3 1922 aaKnown RBP8.28□□□□□ -1.08
SPG11-204ENST00000557866 RPTORQ8N122 1335 aa8.28□□□□□ -1.08
SPG11-204ENST00000557866 TBX3O15119 743 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 ZBED4O75132 1171 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 RPN1P04843 607 aaKnown RBP8.27□□□□□ -1.09
SPG11-204ENST00000557866 ALAS1P13196 640 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 ATP1A3P13637 1013 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 UBXN2AP68543 259 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 MCM6Q14566 821 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 TMEM266Q2M3C6 531 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 HS1BP3Q53T59 392 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 HYIQ5T013 277 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 SLC30A10Q6XR72 485 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 LYSMD3Q7Z3D4 306 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 IL31RAQ8NI17 732 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 ENOX1Q8TC92 643 aaKnown RBP8.27□□□□□ -1.09
SPG11-204ENST00000557866 SYTL5Q8TDW5 730 aaPredicted RBP8.27□□□□□ -1.09
SPG11-204ENST00000557866 CCDC34Q96HJ3 373 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 CLMNQ96JQ2 1002 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 C7orf25Q9BPX7 421 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 CUEDC2Q9H467 287 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 VAV3Q9UKW4 847 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 PCDHA12Q9UN75 941 aa8.27□□□□□ -1.09
SPG11-204ENST00000557866 MYMKA6NI61 221 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 SMTNL1A8MU46 457 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 EML1O00423 815 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 PPP1R12BO60237 982 aaPredicted RBP8.26□□□□□ -1.09
SPG11-204ENST00000557866 MARCH6O60337 910 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 GRIN3BO60391 1043 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 MED24O75448 989 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 ARP10275 920 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms