RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 UPP2O95045 317 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 ALAS1P13196 640 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 PDE6AP16499 860 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 GTF2F1P35269 517 aaKnown RBP eCLIP8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 RAB15P59190 212 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 PWP2Q15269 919 aaKnown RBP8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 TTF1Q15361 905 aaPredicted RBP8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 ST3GAL2Q16842 350 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 SLC9C2Q5TAH2 1124 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 VASH1Q7L8A9 365 aaPredicted RBP8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 LRRC47Q8N1G4 583 aaKnown RBP8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 LCORLQ8N3X6 602 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 FIBCD1Q8N539 461 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 TMEM105Q8N8V8 129 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 TOP1MTQ969P6 601 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 CYP39A1Q9NYL5 469 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 USP15Q9Y4E8 981 aaPredicted RBP8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 ZNF532Q9HCE3 1301 aa8.02□□□□□ -1.13
SPTLC2-206ENST00000557566 MYO10Q9HD67 2058 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 CYP2D7A0A087X1C5 515 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 PNMA6EA0A0J9YXQ4 647 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 GRM6O15303 877 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 CSPG5O95196 566 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 MMP1P03956 469 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 GNAI2P04899 355 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 ATF7P17544 494 aaPredicted RBP8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 FSHRP23945 695 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 BMPR1AP36894 532 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 ALDH5A1P51649 535 aaPredicted RBP8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 STAT2P52630 851 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 PTK7Q13308 1070 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 MBTPS1Q14703 1052 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 GLIPR1L2Q4G1C9 344 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 ZNF618Q5T7W0 954 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 NSMFQ6X4W1 530 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 PLEKHM2Q8IWE5 1019 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 RPAP2Q8IXW5 612 aaPredicted RBP8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 KIAA2013Q8IYS2 634 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 DBF4BQ8NFT6 615 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 KCNG4Q8TDN1 519 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 SCFD2Q8WU76 684 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 MPHOSPH6Q99547 160 aaKnown RBP8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 CCDC8Q9H0W5 538 aaPredicted RBP8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 ARMT1Q9H993 441 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 TLR7Q9NYK1 1049 aaKnown RBP8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 CLEC1BQ9P126 229 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 GTF2IRD1Q9UHL9 959 aa8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 CDV3Q9UKY7 258 aaKnown RBP8.01□□□□□ -1.13
SPTLC2-206ENST00000557566 TMEM232C9JQI7 657 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 ST8SIA5O15466 376 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 LZTS3O60299 673 aaPredicted RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 LMNAP02545 664 aaKnown RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 TXNP10599 105 aaKnown RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 BMP3P12645 472 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 PDE4BQ07343 736 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 IKQ13123 557 aaPredicted RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 MTMR3Q13615 1198 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 COL9A2Q14055 689 aaPredicted RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 MUM1L1Q5H9M0 696 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 UBALD2Q8IYN6 164 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 EFHBQ8N7U6 833 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 C7orf31Q8N865 590 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 CHURC1Q8WUH1 139 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 SEPT8Q92599 483 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 IL17RAQ96F46 866 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 IFIH1Q9BYX4 1025 aaKnown RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 SEMA4AQ9H3S1 761 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 DLL3Q9NYJ7 618 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 CLIP2Q9UDT6 1046 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 NOB1Q9ULX3 412 aaKnown RBP8□□□□□ -1.13
SPTLC2-206ENST00000557566 SYNPO2Q9UMS6 1093 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 OTOGLQ3ZCN5 2332 aa8□□□□□ -1.13
SPTLC2-206ENST00000557566 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 RSPH10B2B2RC85 870 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 PIK3CDO00329 1044 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 PRKAB2O43741 272 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 MBD4O95243 580 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 MMP3P08254 477 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 RSPH10BP0C881 870 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 CLCN5P51795 746 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 TRIM71Q2Q1W2 868 aaKnown RBP7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 MAP7D1Q3KQU3 841 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 SLFNL1Q499Z3 407 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 PLEKHG4Q58EX7 1191 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 C20orf194Q5TEA3 1177 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 FAM160B2Q86V87 743 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 GMCL1P1Q8NEA9 526 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 COPS5Q92905 334 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 HINFPQ9BQA5 517 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 KATNAL1Q9BW62 490 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 PLVAPQ9BX97 442 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 MFSD1Q9H3U5 465 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 BARX2Q9UMQ3 279 aaPredicted RBP7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 SORCS3Q9UPU3 1222 aa7.99□□□□□ -1.13
SPTLC2-206ENST00000557566 FASNP49327 2511 aaKnown RBP7.98□□□□□ -1.13
SPTLC2-206ENST00000557566 MYH7BA7E2Y1 1941 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms