RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 PTK7Q13308 1070 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 ITGB3BPQ13352 177 aaPredicted RBP15.96■□□□□ 0.15
SLIRP-207ENST00000556831 GNL2Q13823 731 aaKnown RBP15.96■□□□□ 0.15
SLIRP-207ENST00000556831 CRYGNQ8WXF5 182 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 TBC1D32Q96NH3 1257 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 GUCD1Q96NT3 240 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 GJB4Q9NTQ9 266 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 NRCAMQ92823 1304 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 GSTTP1A0A1W2PQM5 241 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 MARCH6O60337 910 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 GAS7O60861 476 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 ACTN1P12814 892 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 SLC26A2P50443 739 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 ST3GAL1Q11201 340 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 PPFIA1Q13136 1202 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 INF2Q27J81 1249 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 LETM2Q2VYF4 491 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 TJAP1Q5JTD0 557 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 TMEM240Q5SV17 173 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 PIK3AP1Q6ZUJ8 805 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 NEK8Q86SG6 692 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 SMAP1Q8IYB5 467 aaPredicted RBP15.95■□□□□ 0.14
SLIRP-207ENST00000556831 C8orf76Q96K31 380 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 KIF2CQ99661 725 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 TEKT3Q9BXF9 490 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 HCN4Q9Y3Q4 1203 aa15.95■□□□□ 0.14
SLIRP-207ENST00000556831 TET1Q8NFU7 2136 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 PARNO95453 639 aaKnown RBP15.94■□□□□ 0.14
SLIRP-207ENST00000556831 FGBP02675 491 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 PSAPP07602 524 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 SELPP16109 830 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 GCFC2P16383 781 aaKnown RBP15.94■□□□□ 0.14
SLIRP-207ENST00000556831 STAT5BP51692 787 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 LRCH2Q5VUJ6 765 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 ZNF746Q6NUN9 644 aaPredicted RBP15.94■□□□□ 0.14
SLIRP-207ENST00000556831 MOXD1Q6UVY6 613 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 LRRC8DQ7L1W4 858 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 DEFB128Q7Z7B8 93 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 CKAP2LQ8IYA6 745 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 MAFAQ8NHW3 353 aaPredicted RBP15.94■□□□□ 0.14
SLIRP-207ENST00000556831 FTOQ9C0B1 505 aaKnown RBP eCLIP15.94■□□□□ 0.14
SLIRP-207ENST00000556831 TSHZ2Q9NRE2 1034 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 SETD4Q9NVD3 440 aa15.94■□□□□ 0.14
SLIRP-207ENST00000556831 CXXC1Q9P0U4 656 aaPredicted RBP15.94■□□□□ 0.14
SLIRP-207ENST00000556831 DDX25Q9UHL0 483 aaKnown RBP15.94■□□□□ 0.14
SLIRP-207ENST00000556831 ZBBXA8MT70 800 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 GRXCR1A8MXD5 290 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 WDR64B1ANS9 1081 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 M0R2N6 131 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 CCNT1O60563 726 aaKnown RBP15.93■□□□□ 0.14
SLIRP-207ENST00000556831 TDP2O95551 362 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 MMP1P03956 469 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 FDPSP14324 419 aaKnown RBP15.93■□□□□ 0.14
SLIRP-207ENST00000556831 THPOP40225 353 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 GPNMBQ14956 572 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 NPY5RQ15761 445 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 TCTN1Q2MV58 587 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 Q4G0T1 1027 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 ZNF365Q70YC5 407 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 PLPPR4Q7Z2D5 763 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 RSPH3Q86UC2 560 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 DIS3L2Q8IYB7 885 aaKnown RBP15.93■□□□□ 0.14
SLIRP-207ENST00000556831 RIT2Q99578 217 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 RNPEPQ9H4A4 650 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 ZNF302Q9NR11 478 aa15.93■□□□□ 0.14
SLIRP-207ENST00000556831 RRN3P2A6NIE6 340 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 MSH4O15457 936 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 CHMP2AO43633 222 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 LGR5O75473 907 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 IQCF3P0C7M6 154 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 CKBP12277 381 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 SFNP31947 248 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 JAK3P52333 1124 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 IGBP1P78318 339 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 GRIK4Q16099 956 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 KRT40Q6A162 431 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 PDXDC2PQ6P474 469 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 SERINC5Q86VE9 423 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 LMBR1Q8WVP7 490 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 ZBTB10Q96DT7 871 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 PCYT2Q99447 389 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 OSBPL7Q9BZF2 842 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 TUBE1Q9UJT0 475 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 PCDHA10Q9Y5I2 948 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 GBF1Q92538 1859 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 CHD9Q3L8U1 2897 aa15.92■□□□□ 0.14
SLIRP-207ENST00000556831 CYP3A7-CYP3A51PA0A087WV96 503 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 POTEB3A0JP26 581 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 TREHO43280 583 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 CAND2O75155 1236 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 BAG4O95429 457 aaKnown RBP15.91■□□□□ 0.14
SLIRP-207ENST00000556831 CCNE2O96020 404 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 RPLP2P05387 115 aaKnown RBP15.91■□□□□ 0.14
SLIRP-207ENST00000556831 CYP3A7P24462 503 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 RBL2Q08999 1139 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 NR5A1Q13285 461 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 TRIM71Q2Q1W2 868 aaKnown RBP15.91■□□□□ 0.14
SLIRP-207ENST00000556831 TAF2Q6P1X5 1199 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 TRAF7Q6Q0C0 670 aa15.91■□□□□ 0.14
SLIRP-207ENST00000556831 POTEBQ6S5H4 581 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms