RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 SYNPOQ8N3V7 929 aa5.26□□□□□ -1.57
SUPT16H-206ENST00000556309 ZNF526Q8TF50 670 aaPredicted RBP5.26□□□□□ -1.57
SUPT16H-206ENST00000556309 FEZ1Q99689 392 aa5.26□□□□□ -1.57
SUPT16H-206ENST00000556309 BDH2Q9BUT1 245 aa5.26□□□□□ -1.57
SUPT16H-206ENST00000556309 FFAR3O14843 346 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 FAHP16930 419 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 PTPN1P18031 435 aaKnown RBP5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 KCNC1P48547 511 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 EPHA5P54756 1037 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 ITGA1P56199 1179 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 HTRA3P83110 453 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 SEC23AQ15436 765 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 TM4SF20Q53R12 229 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 DALRD3Q5D0E6 543 aaKnown RBP5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 CDCA2Q69YH5 1023 aaPredicted RBP5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 HHIPL2Q6UWX4 724 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 LIPIQ6XZB0 460 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 KIAA0907Q7Z7F0 614 aaPredicted RBP5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 DDX53Q86TM3 631 aaKnown RBP5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 PROSER1Q86XN7 944 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 ZDHHC14Q8IZN3 488 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 C2orf69Q8N8R5 385 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 NINJ1Q92982 152 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 C11orf84Q9BUA3 381 aaPredicted RBP5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 SPATA6Q9NWH7 488 aaPredicted RBP5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 NUB1Q9Y5A7 615 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 ATP23Q9Y6H3 246 aa5.25□□□□□ -1.57
SUPT16H-206ENST00000556309 FAM83GA6ND36 823 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 SMARCA5O60264 1052 aaPredicted RBP5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 KPNA6O60684 536 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 NEK4P51957 841 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 GYS2P54840 703 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 ADAM9Q13443 819 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 CFAP100Q494V2 611 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 PLEKHG4Q58EX7 1191 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 LRRTM3Q86VH5 581 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 NLGN4XQ8N0W4 816 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 TTLL11Q8NHH1 800 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 WNK4Q96J92 1243 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 MAGEC2Q9UBF1 373 aaPredicted RBP5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 CROTQ9UKG9 612 aa5.24□□□□□ -1.57
SUPT16H-206ENST00000556309 SLC12A8A0AV02 714 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 PRAMEF25A6NGN4 478 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 B4E1Z4 1266 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 TRAF5O00463 557 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 C4BPAP04003 597 aaKnown RBP5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 GLRBP48167 497 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 DLX2Q07687 328 aaPredicted RBP5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 RTP5Q14D33 572 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 TMEM132BQ14DG7 1078 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 PCBP1Q15365 356 aaKnown RBP eCLIP5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 VWA3BQ502W6 1294 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 FIGNQ5HY92 759 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 CD276Q5ZPR3 534 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 UBE2R2Q712K3 238 aaPredicted RBP5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 NOSTRINQ8IVI9 506 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 LINC00482Q8N8I6 264 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 KYQ8NBH2 561 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 TP53I13Q8NBR0 393 aaPredicted RBP5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 TARS2Q9BW92 718 aaKnown RBP5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 SLC39A2Q9NP94 309 aa5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 NGRNQ9NPE2 291 aaKnown RBP5.23□□□□□ -1.57
SUPT16H-206ENST00000556309 PTPDC1A2A3K4 754 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 C1QTNF3-AMACRE9PGA6 284 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 AKAP8O43823 692 aaKnown RBP5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 CLASP2O75122 1294 aaKnown RBP5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 ZBTB48P10074 688 aaPredicted RBP5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 THBS2P35442 1172 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 FLT3P36888 993 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 MAGEA10P43363 369 aaPredicted RBP5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 MECP2P51608 486 aaKnown RBP5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 ZXDAP98168 799 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 IRF9Q00978 393 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 PFKPQ01813 784 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 UBXN11Q5T124 520 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 VASNQ6EMK4 673 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 PKN3Q6P5Z2 889 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 SAPCD2Q86UD0 394 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 NXPE1Q8N323 547 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 CHST14Q8NCH0 376 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 DDX1Q92499 740 aaKnown RBP5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 MFSD3Q96ES6 412 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 MTFR1LQ9H019 292 aa5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 INTS7Q9NVH2 962 aaKnown RBP5.22□□□□□ -1.57
SUPT16H-206ENST00000556309 ZNF891A8MT65 544 aaPredicted RBP5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 CBX4O00257 560 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 DDX3XO00571 662 aaKnown RBP eCLIP5.21□□□□□ -1.582e-50■■■□□ 19.1
SUPT16H-206ENST00000556309 NPTXRO95502 500 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 MMEP08473 750 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 MYCLP1P12525 358 aaPredicted RBP5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 HSD3B2P26439 372 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 MC4RP32245 332 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 DBPQ10586 325 aaPredicted RBP5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 SKIDA1Q1XH10 827 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 TTLL7Q6ZT98 887 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 SYT8Q8NBV8 401 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 SPATA25Q9BR10 227 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 ADAM7Q9H2U9 754 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 CABP5Q9NP86 173 aa5.21□□□□□ -1.58
SUPT16H-206ENST00000556309 PLAAQ9Y263 795 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms