RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 TGIF2Q9GZN2 237 aa6.78□□□□□ -1.32
PRKCH-220ENST00000556164 TUT1Q9H6E5 874 aaKnown RBP6.78□□□□□ -1.32
PRKCH-220ENST00000556164 CTNNA3Q9UI47 895 aa6.78□□□□□ -1.32
PRKCH-220ENST00000556164 MRPL11Q9Y3B7 192 aaKnown RBP6.78□□□□□ -1.32
PRKCH-220ENST00000556164 PPME1Q9Y570 386 aa6.78□□□□□ -1.32
PRKCH-220ENST00000556164 KIAA1671Q9BY89 1806 aa6.78□□□□□ -1.32
PRKCH-220ENST00000556164 LOXHD1Q8IVV2 1947 aa6.78□□□□□ -1.32
PRKCH-220ENST00000556164 ZMYM6O95789 1325 aa6.77□□□□□ -1.32
PRKCH-220ENST00000556164 NEDD4P46934 1319 aa6.77□□□□□ -1.32
PRKCH-220ENST00000556164 SALL3Q9BXA9 1300 aa6.77□□□□□ -1.32
PRKCH-220ENST00000556164 ZNF318Q5VUA4 2279 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 RSPH10B2B2RC85 870 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 CFAP99D6REC4 459 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 DCXO43602 365 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 EIF3JO75822 258 aaKnown RBP6.77□□□□□ -1.33
PRKCH-220ENST00000556164 UPP2O95045 317 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 CFBP00751 764 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 NR3C2P08235 984 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 CTSHP09668 335 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 RSPH10BP0C881 870 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 PCP11498 1178 aaKnown RBP6.77□□□□□ -1.33
PRKCH-220ENST00000556164 MYCLP12524 364 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-220ENST00000556164 GCGRP47871 477 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 MRE11P49959 708 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 HTRA4P83105 476 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-220ENST00000556164 NMIQ13287 307 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-220ENST00000556164 GPM6BQ13491 265 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 NR6A1Q15406 480 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 EPC2Q52LR7 807 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 ASPRV1Q53RT3 343 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 TCEAL5Q5H9L2 206 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 IQCA1Q86XH1 822 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 FBXO11Q86XK2 927 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 ADGRF4Q8IZF3 695 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 NEK9Q8TD19 979 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 ESR2Q92731 530 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 SPATA33Q96N06 139 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 SAMD11Q96NU1 681 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 MAF1Q9H063 256 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 RNF41Q9H4P4 317 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-220ENST00000556164 KAT14Q9H8E8 782 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 VAT1LQ9HCJ6 419 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 PXMP2Q9NR77 195 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 CLDND1Q9NY35 253 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 FAM50BQ9Y247 325 aa6.77□□□□□ -1.33
PRKCH-220ENST00000556164 CCDC171Q6TFL3 1326 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 PIEZO1Q92508 2521 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 C17orf102A2RUQ5 167 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 TRIM6-TRIM34B2RNG4 842 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 H3BNC9 293 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 PPFIA4O75335 1185 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 GGPS1O95749 300 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 PARP1P09874 1014 aaKnown RBP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 HOXD8P13378 290 aaPredicted RBP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 PDE1AP54750 535 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 NHLH1Q02575 133 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 ZP2Q05996 745 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 HSDL1Q3SXM5 330 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 PLEKHG4Q58EX7 1191 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 CELF3Q5SZQ8 465 aaKnown RBP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 ANKRD45Q5TZF3 282 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 DIEXFQ68CQ4 756 aaKnown RBP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 RPAINQ86UA6 219 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 SERINC5Q86VE9 423 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 DGKHQ86XP1 1220 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 TMEM192Q8IY95 271 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 SEPT8Q92599 483 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 ATP6V0A1Q93050 837 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 ZDHHC16Q969W1 377 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 PABPC5Q96DU9 382 aaKnown RBP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 FBXL18Q96ME1 805 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 IFIH1Q9BYX4 1025 aaKnown RBP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 NSUN3Q9H649 340 aaKnown RBP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRKCH-220ENST00000556164 COL4A6Q14031 1691 aa6.76□□□□□ -1.33
PRKCH-220ENST00000556164 B4E1Z4 1266 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 NOP56O00567 594 aaKnown RBP6.75□□□□□ -1.33
PRKCH-220ENST00000556164 ZNF213O14771 459 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 TREHO43280 583 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 RGS20O76081 388 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 CLSTN1O94985 981 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 CSPG5O95196 566 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 SMIM10L2AP0DMW4 78 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 SMIM10L2BP0DMW5 78 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 UBA1P22314 1058 aaKnown RBP6.75□□□□□ -1.33
PRKCH-220ENST00000556164 HOXA13P31271 388 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-220ENST00000556164 CTNNB1P35222 781 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 HSD17B4P51659 736 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 GNL2Q13823 731 aaKnown RBP6.75□□□□□ -1.33
PRKCH-220ENST00000556164 PGM5Q15124 567 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 CLUL1Q15846 466 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 ECM1Q16610 540 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 CCDC178Q5BJE1 867 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 NT5DC4Q86YG4 428 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 ADHFE1Q8IWW8 467 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 ENAHQ8N8S7 591 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-220ENST00000556164 RDH13Q8NBN7 331 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 IL31RAQ8NI17 732 aa6.75□□□□□ -1.33
PRKCH-220ENST00000556164 GPKOWQ92917 476 aaPredicted RBP eCLIP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms