RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PRKD1Q15139 912 aaPredicted RBP7.55□□□□□ -1.2
VRK1-205ENST00000555402 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 MIIPQ5JXC2 388 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 GTF2IRD2BQ6EKJ0 949 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 IQCEQ6IPM2 695 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 GTF2IRD2Q86UP8 949 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 DHX37Q8IY37 1157 aaKnown RBP7.55□□□□□ -1.2
VRK1-205ENST00000555402 ARRDC4Q8NCT1 418 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 FRS2Q8WU20 508 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 CHFRQ96EP1 664 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 WRNIP1Q96S55 665 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 TMEM209Q96SK2 561 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
VRK1-205ENST00000555402 ADAM29Q9UKF5 820 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 HGSO14964 777 aaPredicted RBP7.54□□□□□ -1.2
VRK1-205ENST00000555402 SNRPB2P08579 225 aaKnown RBP7.54□□□□□ -1.2
VRK1-205ENST00000555402 BCL6P41182 706 aa7.54□□□□□ -1.2
VRK1-205ENST00000555402 PABPC4Q13310 644 aaKnown RBP eCLIP7.54□□□□□ -1.25e-11■□□□□ 10.7
VRK1-205ENST00000555402 NIM1KQ8IY84 436 aa7.54□□□□□ -1.2
VRK1-205ENST00000555402 NINJ1Q92982 152 aa7.54□□□□□ -1.2
VRK1-205ENST00000555402 ZNF503Q96F45 646 aa7.54□□□□□ -1.2
VRK1-205ENST00000555402 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
VRK1-205ENST00000555402 WASF3Q9UPY6 502 aa7.54□□□□□ -1.2
VRK1-205ENST00000555402 NOP58Q9Y2X3 529 aaKnown RBP7.54□□□□□ -1.2
VRK1-205ENST00000555402 WDR33Q9C0J8 1336 aaKnown RBP7.53□□□□□ -1.2
VRK1-205ENST00000555402 PLD2O14939 933 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 LRG1P02750 347 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 CDK11BP21127 795 aaKnown RBP7.53□□□□□ -1.2
VRK1-205ENST00000555402 IGFL4Q6B9Z1 124 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 RNF207Q6ZRF8 634 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 NLRP10Q86W26 655 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 KCTD13Q8WZ19 329 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 OSBP2Q969R2 916 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 MFSD3Q96ES6 412 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 GNRHR2Q96P88 292 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 SEC61A2Q9H9S3 476 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 PCDH12Q9NPG4 1184 aa7.53□□□□□ -1.2
VRK1-205ENST00000555402 TCRBV5S2A0A599 114 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 FOXS1O43638 330 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 CNOT4O95628 575 aaKnown RBP7.52□□□□□ -1.21
VRK1-205ENST00000555402 MYCLP1P12525 358 aaPredicted RBP7.52□□□□□ -1.21
VRK1-205ENST00000555402 HOXC12P31275 282 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 ECI1P42126 302 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 GTF2A2P52657 109 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 INHBEP58166 350 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 CYP4F3Q08477 520 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 SF1Q15637 639 aaKnown RBP7.52□□□□□ -1.21
VRK1-205ENST00000555402 CHRNA2Q15822 529 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 FNDC3BQ53EP0 1204 aaKnown RBP7.52□□□□□ -1.21
VRK1-205ENST00000555402 TMEM169Q96HH4 297 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 MRPL4Q9BYD3 311 aaKnown RBP7.52□□□□□ -1.21
VRK1-205ENST00000555402 BRINP2Q9C0B6 783 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 NKX2-4Q9H2Z4 354 aa7.52□□□□□ -1.21
VRK1-205ENST00000555402 ARNTLO00327 626 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 DLX3O60479 287 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 TADA3O75528 432 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 RFPL3O75679 317 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 COL6A1P12109 1028 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 CNGA1P29973 690 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 ABHD18Q0P651 414 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 TCTN3Q6NUS6 607 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 TMC5Q6UXY8 1006 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 ZNF575Q86XF7 245 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 NUDT10Q8NFP7 164 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 NDOR1Q9UHB4 597 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 SFMBT1Q9UHJ3 866 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 COA3Q9Y2R0 106 aaPredicted RBP7.51□□□□□ -1.21
VRK1-205ENST00000555402 PCDHB4Q9Y5E5 795 aa7.51□□□□□ -1.21
VRK1-205ENST00000555402 BLACEA4D250 179 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 CPP00450 1065 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 CAPNS1P04632 268 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 GFRA1P56159 465 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 NRN1LQ496H8 165 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 STEAP3Q658P3 488 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 E4F1Q66K89 784 aaPredicted RBP7.5□□□□□ -1.21
VRK1-205ENST00000555402 CCDC103Q8IW40 242 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 CLUHP3Q96NS8 147 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 CEP89Q96ST8 783 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 ADOQ96SZ5 270 aa7.5□□□□□ -1.21
VRK1-205ENST00000555402 TMEFF2Q9UIK5 374 aaPredicted RBP7.5□□□□□ -1.21
VRK1-205ENST00000555402 KLHL18O94889 574 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 GABREP78334 506 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 MAP4K2Q12851 820 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 PRSS53Q2L4Q9 553 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 CT47A1Q5JQC4 288 aaPredicted RBP7.49□□□□□ -1.21
VRK1-205ENST00000555402 USP53Q70EK8 1073 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 RALYLQ86SE5 291 aaKnown RBP7.49□□□□□ -1.21
VRK1-205ENST00000555402 TMEM145Q8NBT3 493 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 DIO2Q92813 273 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 IKZF4Q9H2S9 585 aa7.49□□□□□ -1.21
VRK1-205ENST00000555402 ZFR2Q9UPR6 939 aaKnown RBP7.49□□□□□ -1.21
VRK1-205ENST00000555402 MYO1BO43795 1136 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 ZNF202O95125 648 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 APPP05067 770 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 DPTQ07507 201 aa7.48□□□□□ -1.21
VRK1-205ENST00000555402 USP39Q53GS9 565 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms