RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 CENPPQ6IPU0 288 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 CYB5D1Q6P9G0 228 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 UNC13DQ70J99 1090 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 SLC51AQ86UW1 340 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 FUKQ8N0W3 1084 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 MMTAG2Q9BU76 263 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 CPVLQ9H3G5 476 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 KDM4CQ9H3R0 1056 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 CD248Q9HCU0 757 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 RIC8AQ9NPQ8 531 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 SLC12A6Q9UHW9 1150 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 TXKP42681 527 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 KLK7P49862 253 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 GTF2IP78347 998 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 ANKRD20A8PQ5CZ79 823 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 GPATCH4Q5T3I0 446 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 PDXDC1Q6P996 788 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 FMNL3Q8IVF7 1028 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 LRRC15Q8TF66 581 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 CASKIN2Q8WXE0 1202 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 UBA5Q9GZZ9 404 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 NDST4Q9H3R1 872 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 TMEM59LQ9UK28 342 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 PLAAQ9Y263 795 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 ATP6V0A2Q9Y487 856 aa11.72□□□□□ -0.53
MTHFD1-210ENST00000555252 LTBP1Q14766 1721 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 QSER1Q2KHR3 1735 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 HLA-DOAP06340 250 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 PLEKP08567 350 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 SLC8A3P57103 927 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 ZNF543Q08ER8 600 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 STK4Q13043 487 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 GRB10Q13322 594 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 SLMAPQ14BN4 828 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 NAB2Q15742 525 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 MEI1Q5TIA1 1274 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 KRT79Q5XKE5 535 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 SEPT12Q8IYM1 358 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 CACNA2D3Q8IZS8 1091 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 GUF1Q8N442 669 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 CEP120Q8N960 986 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 BAP1Q92560 729 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 CENPTQ96BT3 561 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 CNOT10Q9H9A5 744 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 SERPINB13Q9UIV8 391 aa11.71□□□□□ -0.53
MTHFD1-210ENST00000555252 KIF3CO14782 793 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 GSTA1P08263 222 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 FAM153BP0C7A2 387 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 SATB1Q01826 763 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 FAM153CQ494X1 144 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 SLC9C1Q4G0N8 1177 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 DPP8Q6V1X1 898 aaPredicted RBP11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 MAATS1Q7Z4T9 603 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 N4BP2L2Q92802 583 aaPredicted RBP11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 MTMR8Q96EF0 704 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 PBKQ96KB5 322 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 CCDC17Q96LX7 622 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 TMEM260Q9NX78 707 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 DDX20Q9UHI6 824 aaKnown RBP11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 FAM153AQ9UHL3 310 aa11.71□□□□□ -0.54
MTHFD1-210ENST00000555252 FRMPD2Q68DX3 1309 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 LRRC53A6NM62 1247 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 H0YGN5 161 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 MGRN1O60291 552 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 SERPING1P05155 500 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 AKR1B1P15121 316 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 CXCR5P32302 372 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 PPP2R2AP63151 447 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 TMEM119Q4V9L6 283 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 GKAP1Q5VSY0 366 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 CRELD2Q6UXH1 353 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 CCHCR1Q8TD31 782 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 IFT81Q8WYA0 676 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 RAD54LQ92698 747 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 CUL5Q93034 780 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 TSG101Q99816 390 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 BATF3Q9NR55 127 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 BLOC1S4Q9NUP1 217 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 CEP72Q9P209 647 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 NFS1Q9Y697 457 aa11.7□□□□□ -0.54
MTHFD1-210ENST00000555252 CCDC188H7C350 402 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 CLK2P49760 499 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 SEC24CP53992 1094 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 PICALMQ13492 652 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 RIPK1Q13546 671 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 IFI16Q16666 785 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms