RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CPLX2Q6PUV4 134 aaKnown RBP14.1□□□□□ -0.15
SHMT2-214ENST00000554604 SERINC5Q86VE9 423 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 SLC17A8Q8NDX2 589 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 CCDC148Q8NFR7 591 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 CYP2W1Q8TAV3 490 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 BICD2Q8TD16 824 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 GLG1Q92896 1179 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 SDF4Q9BRK5 362 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 ZMYND12Q9H0C1 365 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 RNPEPQ9H4A4 650 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 JPH1Q9HDC5 661 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-214ENST00000554604 TELO2Q9Y4R8 837 aa14.1□□□□□ -0.15
SHMT2-214ENST00000554604 TREHO43280 583 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 FOSL2P15408 326 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 KCNJ6P48051 423 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 HMGN5P82970 282 aaKnown RBP14.09□□□□□ -0.15
SHMT2-214ENST00000554604 ARHGAP4P98171 946 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 SSRP1Q08945 709 aaKnown RBP14.09□□□□□ -0.15
SHMT2-214ENST00000554604 SCRN1Q12765 414 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 HIC1Q14526 733 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 NTRK3Q16288 839 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 PKN1Q16512 942 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 ZNF618Q5T7W0 954 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 GPT2Q8TD30 523 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 MYLIPQ8WY64 445 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 SMARCAD1Q9H4L7 1026 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 SLC28A3Q9HAS3 691 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 SETD4Q9NVD3 440 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 ERAP1Q9NZ08 941 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 SLC9A2Q9UBY0 812 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
SHMT2-214ENST00000554604 PTPRSQ13332 1948 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 WDR81Q562E7 1941 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 GSTTP1A0A1W2PQM5 241 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 VPS37CA5D8V6 355 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-214ENST00000554604 BAIAP3O94812 1187 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 ARP10275 920 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.16
SHMT2-214ENST00000554604 MARK3P27448 753 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 MRE11P49959 708 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 RABGGTBP53611 331 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 ZNF445P59923 1031 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 GRIN2CQ14957 1233 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 TRIM71Q2Q1W2 868 aaKnown RBP14.08□□□□□ -0.16
SHMT2-214ENST00000554604 NSUN7Q8NE18 718 aaKnown RBP14.08□□□□□ -0.16
SHMT2-214ENST00000554604 WNT8BQ93098 351 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 SLC9A7Q96T83 725 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 NKX2-4Q9H2Z4 354 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 AZI2Q9H6S1 392 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 VPS54Q9P1Q0 977 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 PCDHA11Q9Y5I1 949 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 MICAL3Q7RTP6 2002 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 NFASCO94856 1347 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 NRCAMQ92823 1304 aa14.08□□□□□ -0.16
SHMT2-214ENST00000554604 EVPLQ92817 2033 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 KIF28PB7ZC32 967 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 MEIS1O00470 390 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 NBNO60934 754 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 HOXC8P31273 242 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 PPFIA1Q13136 1202 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 CNKSR3Q6P9H4 555 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 NIPA1Q7RTP0 329 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 PHOSPHO2Q8TCD6 241 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 AGO4Q9HCK5 861 aaKnown RBP14.07□□□□□ -0.16
SHMT2-214ENST00000554604 YBX2Q9Y2T7 364 aaKnown RBP14.07□□□□□ -0.16
SHMT2-214ENST00000554604 PRUNE2Q8WUY3 3088 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 LOXHD1Q8IVV2 1947 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 CUL9Q8IWT3 2517 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 EYSQ5T1H1 3165 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 CHD7Q9P2D1 2997 aa14.07□□□□□ -0.16
SHMT2-214ENST00000554604 ADAMTS3O15072 1205 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 JAK2O60674 1132 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 CXCL10P02778 98 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 CYP3A4P08684 503 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 CTSHP09668 335 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 NLRP5P59047 1200 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 ACTR2P61160 394 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 IKBKEQ14164 716 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 CAVIN1Q6NZI2 390 aaKnown RBP14.06□□□□□ -0.16
SHMT2-214ENST00000554604 MAFAQ8NHW3 353 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-214ENST00000554604 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 GAS2L1Q99501 681 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-214ENST00000554604 SH3GLB2Q9NR46 395 aa14.06□□□□□ -0.16
SHMT2-214ENST00000554604 ABHD14A-ACY1A0A1B0GW23 586 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 FAM86B1E9PN63 330 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 RBAK-RBAKDNI3L0D1 243 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
SHMT2-214ENST00000554604 IPO5O00410 1097 aaKnown RBP14.05□□□□□ -0.16
SHMT2-214ENST00000554604 EFCAB14O75071 495 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 CAND2O75155 1236 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 LGR5O75473 907 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 CDKL5O76039 1030 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms