RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 FBXO2Q9UK22 296 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ANGEL1Q9UNK9 670 aaKnown RBP2.88□□□□□ -1.95
PRPF39-207ENST00000554439 JRKLQ9Y4A0 524 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 RGPD5Q99666 1765 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 ARFGEF2Q9Y6D5 1785 aa2.88□□□□□ -1.95
PRPF39-207ENST00000554439 BAZ2BQ9UIF8 2168 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CPDO75976 1380 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 hCG_1642624A0A1W2PR95 340 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CTAGE15A4D2H0 777 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 EYA2O00167 538 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SH2B2O14492 632 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF185O15231 689 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 IVLP07476 585 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SNRPA1P09661 255 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CTAGE8P0CG41 777 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 PBX1P40424 430 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 IL15P40933 162 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 IARSP41252 1262 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ARHGAP25P42331 645 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 PLCD1P51178 756 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 RPS26P62854 115 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TRDNQ13061 729 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SPRED3Q2MJR0 410 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 EARS2Q5JPH6 523 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SNAP47Q5SQN1 464 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 FKBP15Q5T1M5 1219 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TTC19Q6DKK2 380 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CTAGE6Q86UF2 777 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 NLRP8Q86W28 1048 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 PPFIBP1Q86W92 1011 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 NOSTRINQ8IVI9 506 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CTAGE4Q8IX94 777 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SYNE4Q8N205 404 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CEP112Q8N8E3 955 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 IGDCC4Q8TDY8 1250 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CAPZA3Q96KX2 299 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ORAI2Q96SN7 254 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CHP1Q99653 195 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 NAPGQ99747 312 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 VPS16Q9H269 839 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TNKS2Q9H2K2 1166 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 LY9Q9HBG7 655 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SPC25Q9HBM1 224 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 METTL14Q9HCE5 456 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 POLD4Q9HCU8 107 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 STRN4Q9NRL3 753 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ADD3Q9UEY8 706 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 GUCA1BQ9UMX6 200 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 MAPK8IP1Q9UQF2 711 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 PCDHB5Q9Y5E4 795 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 DDX60Q8IY21 1712 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CDC14CA4D256 554 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA8AA7E2F4 631 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 H7C1W4 665 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SMIM22K7EJ46 135 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ZBTB43O43298 467 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ERLIN1O75477 346 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 EIF3JO75822 258 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 IDH1O75874 414 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 PRPF6O94906 941 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 HOXD8P13378 290 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 PHKG2P15735 406 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SOX18P35713 384 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 MCAMP43121 646 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CORO7P57737 925 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CUL4BQ13620 913 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CCINQ13939 588 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM29Q14134 588 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TKFCQ3LXA3 575 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SEZ6Q53EL9 994 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 HSP90B2PQ58FF3 399 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 DNAJC21Q5F1R6 531 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TMEM67Q5HYA8 995 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 NT5DC1Q5TFE4 455 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 DIS3L2Q8IYB7 885 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TTC5Q8N0Z6 440 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 MICALL1Q8N3F8 863 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 GPATCH11Q8N954 259 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 MLKLQ8NB16 471 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 PLBD2Q8NHP8 589 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ZCRB1Q8TBF4 217 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 FAM71BQ8TC56 605 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 TRPM4Q8TD43 1214 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 GATAD2BQ8WXI9 593 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 APPBP2Q92624 585 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 KAT2BQ92831 832 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SHISA4Q96DD7 197 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 EEF2KMTQ96G04 330 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 MMS19Q96T76 1030 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 BHLHE41Q9C0J9 482 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 BLZF1Q9H2G9 400 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF576Q9H609 170 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 GPAMQ9HCL2 828 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CABP5Q9NP86 173 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 ZSWIM5Q9P217 1185 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 HOOK1Q9UJC3 728 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 MYO6Q9UM54 1294 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 CTNND2Q9UQB3 1225 aa2.87□□□□□ -1.95
PRPF39-207ENST00000554439 REXO2Q9Y3B8 237 aaKnown RBP2.87□□□□□ -1.95
PRPF39-207ENST00000554439 SYNRGQ9UMZ2 1314 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms