RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 HOXA13P31271 388 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-208ENST00000553846 DUSP6Q16828 381 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 MARCH8Q5T0T0 291 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 TMEM184AQ6ZMB5 413 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 ENAHQ8N8S7 591 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-208ENST00000553846 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-208ENST00000553846 RPGRIP1Q96KN7 1286 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 RIPOR3Q96MK2 946 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 ZKSCAN3Q9BRR0 538 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
PRKCH-208ENST00000553846 TOMM22Q9NS69 142 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 GNAT1P11488 350 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
PRKCH-208ENST00000553846 GATMP50440 423 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 TAF2Q6P1X5 1199 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 SYCE2Q6PIF2 218 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 TSHZ1Q6ZSZ6 1077 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 STAG2Q8N3U4 1231 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 SAMD3Q8N6K7 520 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 AMNQ9BXJ7 453 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
PRKCH-208ENST00000553846 BAZ2BQ9UIF8 2168 aaKnown RBP10.55□□□□□ -0.72
PRKCH-208ENST00000553846 GPR179Q6PRD1 2367 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 CHD6Q8TD26 2715 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 BRD1O95696 1058 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 ARP10275 920 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 CCND2P30279 289 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 NT5C2P49902 561 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 MFSD6Q6ZSS7 791 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
PRKCH-208ENST00000553846 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 NPAS4Q8IUM7 802 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 RASGRP4Q8TDF6 673 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 PPP2R3CQ969Q6 453 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 TMX1Q9H3N1 280 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 MLXIPQ9HAP2 919 aa10.54□□□□□ -0.72
PRKCH-208ENST00000553846 PER2O15055 1255 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 ZBTB5O15062 677 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 CD52P31358 61 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 UBE3AQ05086 875 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 CYFIP1Q7L576 1253 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 FRMD5Q7Z6J6 570 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 KREMEN2Q8NCW0 462 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 ESR2Q92731 530 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 EVI5LQ96CN4 794 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 CDCA3Q99618 268 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-208ENST00000553846 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 HCSTQ9UBK5 93 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 CDH22Q9UJ99 828 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 ZNF215Q9UL58 517 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-208ENST00000553846 PCDHB15Q9Y5E8 787 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 CDY2AQ9Y6F7 541 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 SQORQ9Y6N5 450 aa10.53□□□□□ -0.72
PRKCH-208ENST00000553846 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 FIBPO43427 364 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 CYTH3O43739 400 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 KDM4AO75164 1064 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 STAM2O75886 525 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 PARP1P09874 1014 aaKnown RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 ID4P47928 161 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 ERVFC1P60507 584 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 MRPS6P82932 125 aaKnown RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 NMIQ13287 307 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 NEDD9Q14511 834 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 SEC23AQ15436 765 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 PAN2Q504Q3 1202 aaKnown RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 CWF19L1Q69YN2 538 aaKnown RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 ANKRD54Q6NXT1 300 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 DNAJB3Q8WWF6 145 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 ZBTB10Q96DT7 871 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 ZSCAN10Q96SZ4 725 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 RNF41Q9H4P4 317 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-208ENST00000553846 TLE6Q9H808 572 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 KAT14Q9H8E8 782 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 TUBE1Q9UJT0 475 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 PCDHA1Q9Y5I3 950 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 IGSF9BQ9UPX0 1349 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 SPTBN2O15020 2390 aa10.52□□□□□ -0.73
PRKCH-208ENST00000553846 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 GSTTP1A0A1W2PQM5 241 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 MED19A0JLT2 244 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-208ENST00000553846 FSD2A1L4K1 749 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 MGEA5O60502 916 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 SCG2P13521 617 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 KCNA2P16389 499 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 PPFIA1Q13136 1202 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 GRIK4Q16099 956 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-208ENST00000553846 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-208ENST00000553846 NEK1Q96PY6 1258 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 FTHL17Q9BXU8 183 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms