RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 CCDC60Q8IWA6 550 aaPredicted RBP13.42□□□□□ -0.26
TMEM253-202ENST00000553744 AFAP1L1Q8TED9 768 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 FAM20AQ96MK3 541 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 UNC45AQ9H3U1 944 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 RNPEPQ9H4A4 650 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 PCDHA10Q9Y5I2 948 aa13.42□□□□□ -0.26
TMEM253-202ENST00000553744 UMODL1Q5DID0 1318 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 H3BQV1 296 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 BACH1O14867 736 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 CHMP2AO43633 222 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 PSAPP07602 524 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 GNAT1P11488 350 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 SFNP31947 248 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 CYP2C18P33260 490 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 SLC26A2P50443 739 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 JAK3P52333 1124 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
TMEM253-202ENST00000553744 PTK7Q13308 1070 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 HSCBQ8IWL3 235 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 RDM1Q8NG50 284 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 CAGE1Q8TC20 777 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 LMBR1Q8WVP7 490 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 DHX38Q92620 1227 aaKnown RBP13.41□□□□□ -0.26
TMEM253-202ENST00000553744 HAS1Q92839 578 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
TMEM253-202ENST00000553744 ZNF302Q9NR11 478 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 SAMM50Q9Y512 469 aa13.41□□□□□ -0.26
TMEM253-202ENST00000553744 NRCAMQ92823 1304 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 IGSF9BQ9UPX0 1349 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 NEMFO60524 1076 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 TRAPPC10P48553 1259 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 ADAM17P78536 824 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 FPGSQ05932 587 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 RBL2Q08999 1139 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 PPFIA1Q13136 1202 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 PPP2R5CQ13362 524 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 BFSP2Q13515 415 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 PLCB4Q15147 1175 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
TMEM253-202ENST00000553744 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 PDXDC2PQ6P474 469 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 SLFN12Q8IYM2 578 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 TMEM199Q8N511 208 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 CCDC155Q8N6L0 562 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 ATP6V0A1Q93050 837 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 UBE2OQ9C0C9 1292 aaKnown RBP13.4□□□□□ -0.26
TMEM253-202ENST00000553744 WNT8AQ9H1J5 351 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 DISC1Q9NRI5 854 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 SETD4Q9NVD3 440 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 VAV3Q9UKW4 847 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
TMEM253-202ENST00000553744 MAFBQ9Y5Q3 323 aaPredicted RBP13.4□□□□□ -0.26
TMEM253-202ENST00000553744 A0A1W2PPC1 479 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 TREHO43280 583 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 MARCH6O60337 910 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 BAG4O95429 457 aaKnown RBP13.39□□□□□ -0.27
TMEM253-202ENST00000553744 ATP2B1P20020 1258 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 MCM7P33993 719 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 CCL23P55773 120 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 ORC2Q13416 577 aaPredicted RBP13.39□□□□□ -0.27
TMEM253-202ENST00000553744 PPIGQ13427 754 aaKnown RBP eCLIP13.39□□□□□ -0.27
TMEM253-202ENST00000553744 GRIK4Q16099 956 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 CALCRLQ16602 461 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 SERINC5Q86VE9 423 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 ATP8B4Q8TF62 1192 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
TMEM253-202ENST00000553744 WNT8BQ93098 351 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 GABBR1Q9UBS5 961 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
TMEM253-202ENST00000553744 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
TMEM253-202ENST00000553744 MBLAC1A4D2B0 266 aaPredicted RBP13.38□□□□□ -0.27
TMEM253-202ENST00000553744 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 HBP1O60381 514 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 INSRRP14616 1297 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 CSF2RAP15509 400 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 ATP4AP20648 1035 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 PDCP20941 246 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 TRIM71Q2Q1W2 868 aaKnown RBP13.38□□□□□ -0.27
TMEM253-202ENST00000553744 TTC38Q5R3I4 469 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 SCLYQ96I15 445 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 MTMR9Q96QG7 549 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
TMEM253-202ENST00000553744 COL1A2P08123 1366 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 EML1O00423 815 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 ZNF862O60290 1169 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 IQCF3P0C7M6 154 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 CKBP12277 381 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 SELPP16109 830 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 EPHB4P54760 987 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 IGBP1P78318 339 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 PRKCEQ02156 737 aa13.37□□□□□ -0.27
TMEM253-202ENST00000553744 SPIRE1Q08AE8 756 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms