RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 C12orf42Q96LP6 360 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 PNMA5Q96PV4 448 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 POLR3CQ9BUI4 534 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 NAA15Q9BXJ9 866 aaKnown RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 WDR11Q9BZH6 1224 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 PICK1Q9NRD5 415 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 BLOC1S4Q9NUP1 217 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 GPRC5DQ9NZD1 345 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 MAGEC2Q9UBF1 373 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 ADD3Q9UEY8 706 aaKnown RBP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 NRBP1Q9UHY1 535 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATXN3-221ENST00000553498 GJA3Q9Y6H8 435 aa8.15□□□□□ -1.1
ATXN3-221ENST00000553498 TCHHQ07283 1943 aa8.15□□□□□ -1.11
ATXN3-221ENST00000553498 PSME4Q14997 1843 aa8.15□□□□□ -1.11
ATXN3-221ENST00000553498 SCN9AQ15858 1988 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 A0A1W2PQC6 194 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 OPLAHO14841 1288 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 AXIN1O15169 862 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 ARHGAP6O43182 974 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 STX10O60499 249 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 ZBED4O75132 1171 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 PRCPP42785 496 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 BACE1P56817 501 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 CCZ1BP86790 482 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 CCZ1P86791 482 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-221ENST00000553498 TKFCQ3LXA3 575 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 USH1GQ495M9 461 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 PRR16Q569H4 304 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 TCP11X2Q5H9J9 407 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 KLHL10Q6JEL2 608 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 LDHDQ86WU2 507 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 CNGA4Q8IV77 575 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 CCDC65Q8IXS2 484 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 BANK1Q8NDB2 785 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 P2RX5Q93086 422 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 LENG9Q96B70 501 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF830Q96NB3 372 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-221ENST00000553498 NAP1L5Q96NT1 182 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-221ENST00000553498 PANX2Q96RD6 677 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 MED15Q96RN5 788 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 RIT2Q99578 217 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 KLF16Q9BXK1 252 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-221ENST00000553498 TMX1Q9H3N1 280 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 SLC38A10Q9HBR0 1119 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 TUFT1Q9NNX1 390 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 SAMSN1Q9NSI8 373 aaKnown RBP8.14□□□□□ -1.11
ATXN3-221ENST00000553498 KCND2Q9NZV8 630 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 PYCARDQ9ULZ3 195 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 DNM3Q9UQ16 869 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 CTNND2Q9UQB3 1225 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 CTDP1Q9Y5B0 961 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-221ENST00000553498 PAXBP1Q9Y5B6 917 aa8.14□□□□□ -1.11
ATXN3-221ENST00000553498 SIPA1L1O43166 1804 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 ADAMTSL1Q8N6G6 1762 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 IGLV3-22A0A075B6J6 115 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 KCNJ18B7U540 433 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 ATP2A1O14983 1001 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 ZSCAN12O43309 604 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 ADH1CP00326 375 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 PBX1P40424 430 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 EHHADHQ08426 723 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 SPIRE1Q08AE8 756 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 PPP2R5CQ13362 524 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 KCNJ12Q14500 433 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 AGERQ15109 404 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 TBC1D10BQ4KMP7 808 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-221ENST00000553498 CEP55Q53EZ4 464 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 KIAA1755Q5JYT7 1200 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 DNTTIP2Q5QJE6 756 aaKnown RBP8.13□□□□□ -1.11
ATXN3-221ENST00000553498 CENPPQ6IPU0 288 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 TTI2Q6NXR4 508 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 APTXQ7Z2E3 356 aaKnown RBP8.13□□□□□ -1.11
ATXN3-221ENST00000553498 PPFIBP1Q86W92 1011 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 RETREG2Q8NC44 543 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF280CQ8ND82 737 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 STAMQ92783 540 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 SLC5A5Q92911 643 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 TRIM47Q96LD4 638 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 TSG101Q99816 390 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 NUP58Q9BVL2 599 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 CCPG1Q9ULG6 757 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 PPP1R9AQ9ULJ8 1098 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
ATXN3-221ENST00000553498 FRMPD4Q14CM0 1322 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 RPTORQ8N122 1335 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 FRMD3A2A2Y4 597 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 AKR1B15C9JRZ8 316 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-221ENST00000553498 FAM86B1E9PN63 330 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 MEIS1O00470 390 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 SOCS7O14512 581 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 N4BP3O15049 544 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 MSH4O15457 936 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 MAFGO15525 162 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 GPR37L1O60883 481 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 GNA14O95837 355 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 CFBP00751 764 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 FAM86B2P0C5J1 330 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 PLA2G4BP0C869 781 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms