RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FAM20AQ96MK3 541 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 PCYT2Q99447 389 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 NOC4LQ9BVI4 516 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
TRAFD1-209ENST00000552896 MICAL3Q7RTP6 2002 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 GBF1Q92538 1859 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 KIF28PB7ZC32 967 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 H3BQV1 296 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 NEMFO60524 1076 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 TIMP1P01033 207 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 RAG1P15918 1043 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 PDCP20941 246 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 RBL2Q08999 1139 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 PTGISQ16647 500 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 B3GNT9Q6UX72 402 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 PLPPR4Q7Z2D5 763 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 CCDC60Q8IWA6 550 aaPredicted RBP13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 SLFN12Q8IYM2 578 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 PPP1R13LQ8WUF5 828 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 UIMC1Q96RL1 719 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 GDF15Q99988 308 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 LBHD1Q9BQE6 289 aaPredicted RBP13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 NOD1Q9Y239 953 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 PCDHA10Q9Y5I2 948 aa13.23□□□□□ -0.29
TRAFD1-209ENST00000552896 LAMA2P24043 3122 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 NRCAMQ92823 1304 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 C17orf102A2RUQ5 167 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 WNT7AO00755 349 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 BACH1O14867 736 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 PSAPP07602 524 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 GNAT1P11488 350 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 MARK3P27448 753 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 STAT5BP51692 787 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 PPP2R5CQ13362 524 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 LMBR1Q8WVP7 490 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 HAS1Q92839 578 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 GJA10Q969M2 543 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 PRO3102Q9H379 93 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 UNC45AQ9H3U1 944 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 ZNF302Q9NR11 478 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 DISC1Q9NRI5 854 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 VAV3Q9UKW4 847 aa13.22□□□□□ -0.29
TRAFD1-209ENST00000552896 PTPRSQ13332 1948 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 CHMP2AO43633 222 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 CYP2C9P11712 490 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 ITGB8P26012 769 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 BMP8BP34820 402 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 ADAM17P78536 824 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 MDM2Q00987 491 aaPredicted RBP13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 PPFIA1Q13136 1202 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 PTK7Q13308 1070 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 BFSP2Q13515 415 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 CALCRLQ16602 461 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 LARP1BQ659C4 914 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 MIER3Q7Z3K6 550 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 SERINC5Q86VE9 423 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 BADQ92934 168 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 FAM167AQ96KS9 214 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 PPP1R12CQ9BZL4 782 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 SAMM50Q9Y512 469 aa13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.29
TRAFD1-209ENST00000552896 COL1A2P08123 1366 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 A0A1W2PPC1 479 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 MCM7P33993 719 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 FPGSQ05932 587 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 HIC1Q14526 733 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 GRIK4Q16099 956 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 MCTP1Q6DN14 999 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 PDXDC2PQ6P474 469 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 TMEM199Q8N511 208 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 ATP6V0A1Q93050 837 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
TRAFD1-209ENST00000552896 LAMA3Q16787 3333 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 MBLAC1A4D2B0 266 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 RRN3P2A6NIE6 340 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 MARCH6O60337 910 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 CAND2O75155 1236 aa13.19□□□□□ -0.3
TRAFD1-209ENST00000552896 CYP2C18P33260 490 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms