RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ZSCAN10Q96SZ4 725 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-220ENST00000551716 SENP7Q9BQF6 1050 aa17.71■□□□□ 0.43
CACNB3-220ENST00000551716 KMT2EQ8IZD2 1858 aa17.7■□□□□ 0.42
CACNB3-220ENST00000551716 IER5Q5VY09 327 aa17.7■□□□□ 0.42
CACNB3-220ENST00000551716 TBC1D10CQ8IV04 446 aa17.7■□□□□ 0.42
CACNB3-220ENST00000551716 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
CACNB3-220ENST00000551716 GPKOWQ92917 476 aaPredicted RBP eCLIP17.7■□□□□ 0.42
CACNB3-220ENST00000551716 INPP4AQ96PE3 977 aaPredicted RBP17.7■□□□□ 0.42
CACNB3-220ENST00000551716 BCAS3Q9H6U6 928 aa17.7■□□□□ 0.42
CACNB3-220ENST00000551716 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
CACNB3-220ENST00000551716 TTC3P53804 2025 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 HOXB8P17481 243 aaPredicted RBP17.69■□□□□ 0.42
CACNB3-220ENST00000551716 PPFIA1Q13136 1202 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 MTMR3Q13615 1198 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 DUSP6Q16828 381 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 FCHSD1Q86WN1 690 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 KREMEN2Q8NCW0 462 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 MTMR8Q96EF0 704 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 LRFN2Q9ULH4 789 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 SORCS3Q9UPU3 1222 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 CDY2AQ9Y6F7 541 aa17.69■□□□□ 0.42
CACNB3-220ENST00000551716 KLRF2D3W0D1 207 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 PER2O15055 1255 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 MRPS6P82932 125 aaKnown RBP17.68■□□□□ 0.42
CACNB3-220ENST00000551716 PAN2Q504Q3 1202 aaKnown RBP17.68■□□□□ 0.42
CACNB3-220ENST00000551716 RUFY4Q6ZNE9 571 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 RTN4RL1Q86UN2 441 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-220ENST00000551716 TRIM50Q86XT4 487 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 ENAHQ8N8S7 591 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-220ENST00000551716 DNAJB3Q8WWF6 145 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 TNPO1Q92973 898 aaKnown RBP17.68■□□□□ 0.42
CACNB3-220ENST00000551716 FAM227BQ96M60 508 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 S1PR5Q9H228 398 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 TUBE1Q9UJT0 475 aa17.68■□□□□ 0.42
CACNB3-220ENST00000551716 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 MBLAC1A4D2B0 266 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-220ENST00000551716 M0QZ92 97 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 PDGFBP01127 241 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-220ENST00000551716 SCG2P13521 617 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 CD52P31358 61 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 SPOUT1Q5T280 376 aaKnown RBP17.67■□□□□ 0.42
CACNB3-220ENST00000551716 ASTLQ6HA08 431 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-220ENST00000551716 ANKRD54Q6NXT1 300 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 XRRA1Q6P2D8 792 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 ADSSL1Q8N142 457 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 RASGRP4Q8TDF6 673 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-220ENST00000551716 AGO3Q9H9G7 860 aaKnown RBP17.67■□□□□ 0.42
CACNB3-220ENST00000551716 PUF60Q9UHX1 559 aaKnown RBP17.67■□□□□ 0.42
CACNB3-220ENST00000551716 NEDD4P46934 1319 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 MYO15AQ9UKN7 3530 aa17.67■□□□□ 0.42
CACNB3-220ENST00000551716 RRN3P2A6NIE6 340 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 CLCN5P51795 746 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 MRPS9P82933 396 aaKnown RBP17.66■□□□□ 0.42
CACNB3-220ENST00000551716 GRIK4Q16099 956 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 NLRX1Q86UT6 975 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 NECTIN4Q96NY8 510 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 UBAC1Q9BSL1 405 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 ZSWIM5Q9P217 1185 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 RCAN3Q9UKA8 241 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
CACNB3-220ENST00000551716 PCDHB7Q9Y5E2 793 aa17.66■□□□□ 0.42
CACNB3-220ENST00000551716 PPP1R11O60927 126 aaPredicted RBP17.65■□□□□ 0.42
CACNB3-220ENST00000551716 FGF18O76093 207 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 TCF7P36402 384 aaPredicted RBP17.65■□□□□ 0.42
CACNB3-220ENST00000551716 TECP42680 631 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 PAK2Q13177 524 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 FRMD5Q7Z6J6 570 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 TMEM105Q8N8V8 129 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 VN1R2Q8NFZ6 395 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 LINC01599Q8WXQ3 324 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 MFSD1Q9H3U5 465 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 SMARCAD1Q9H4L7 1026 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 RTEL1Q9NZ71 1219 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 PADI3Q9ULW8 664 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 LZTS1Q9Y250 596 aa17.65■□□□□ 0.42
CACNB3-220ENST00000551716 ATG2AQ2TAZ0 1938 aa17.64■□□□□ 0.42
CACNB3-220ENST00000551716 SP4Q02446 784 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 KCNC3Q14003 757 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 MARCH8Q5T0T0 291 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
CACNB3-220ENST00000551716 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 CES5AQ6NT32 575 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 ZNF589Q86UQ0 364 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-220ENST00000551716 THNSL1Q8IYQ7 743 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 STAG2Q8N3U4 1231 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 SEPT1Q8WYJ6 367 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 GLG1Q92896 1179 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 CDHR1Q96JP9 859 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 KRT23Q9C075 422 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 NGRNQ9NPE2 291 aaKnown RBP17.64■□□□□ 0.41
CACNB3-220ENST00000551716 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 PCDHGC5Q9Y5F6 944 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 FRMPD4Q14CM0 1322 aa17.64■□□□□ 0.41
CACNB3-220ENST00000551716 GVINP1Q7Z2Y8 2422 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 B4E1Z4 1266 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 FSCN2O14926 492 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms