RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SP2Q02086 613 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 SEC23AQ15436 765 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 KCNV1Q6PIU1 500 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 FRMD5Q7Z6J6 570 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 RBM23Q86U06 439 aaKnown RBP14.11□□□□□ -0.15
DDX54-206ENST00000549271 KLHL23Q8NBE8 558 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 RUFY2Q8WXA3 655 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 UBAC1Q9BSL1 405 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 AMNQ9BXJ7 453 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 EHMT1Q9H9B1 1298 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 NCOR2Q9Y618 2525 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 DOCK5Q9H7D0 1870 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 MED19A0JLT2 244 aaPredicted RBP14.1□□□□□ -0.15
DDX54-206ENST00000549271 OPLAHO14841 1288 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 SORBS3O60504 671 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 CHRNA1P02708 482 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 LGALS2P05162 132 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 IFIT1BQ5T764 474 aaKnown RBP14.1□□□□□ -0.15
DDX54-206ENST00000549271 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 STOX1Q6ZVD7 989 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 CENPQQ7L2Z9 268 aaPredicted RBP14.1□□□□□ -0.15
DDX54-206ENST00000549271 CMTR2Q8IYT2 770 aaKnown RBP14.1□□□□□ -0.15
DDX54-206ENST00000549271 CRIPAKQ8N1N5 446 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 VN1R2Q8NFZ6 395 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 POF1BQ8WVV4 589 aa14.1□□□□□ -0.15
DDX54-206ENST00000549271 PALM3A6NDB9 673 aaPredicted RBP14.09□□□□□ -0.15
DDX54-206ENST00000549271 KLRF2D3W0D1 207 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 TGFB3P10600 412 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 UBA1P22314 1058 aaKnown RBP14.09□□□□□ -0.15
DDX54-206ENST00000549271 RBM10P98175 930 aaKnown RBP14.09□□□□□ -0.15
DDX54-206ENST00000549271 STAG2Q8N3U4 1231 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 PDCD2LQ9BRP1 358 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 TLE6Q9H808 572 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 VAT1LQ9HCJ6 419 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 SETD4Q9NVD3 440 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 PCDHGC5Q9Y5F6 944 aa14.09□□□□□ -0.15
DDX54-206ENST00000549271 ZBTB5O15062 677 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 DHX16O60231 1041 aaKnown RBP14.08□□□□□ -0.16
DDX54-206ENST00000549271 PPP1R11O60927 126 aaPredicted RBP14.08□□□□□ -0.16
DDX54-206ENST00000549271 KRT37O76014 449 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 CFBP00751 764 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 CYP21A2P08686 494 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 GHRP10912 638 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 GNAT1P11488 350 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 MGAT3Q09327 533 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 TRAF1Q13077 416 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 LPIN1Q14693 890 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 UBALD2Q8IYN6 164 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 KREMEN2Q8NCW0 462 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 S1PR5Q9H228 398 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 MAD2L2Q9UI95 211 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 TAF6LQ9Y6J9 622 aa14.08□□□□□ -0.16
DDX54-206ENST00000549271 TPRP12270 2363 aaKnown RBP14.08□□□□□ -0.16
DDX54-206ENST00000549271 LOXHD1Q8IVV2 1947 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 FSD2A1L4K1 749 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 PER2O15055 1255 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 BRD1O95696 1058 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 MTMR3Q13615 1198 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 KCNC3Q14003 757 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
DDX54-206ENST00000549271 TMEM184AQ6ZMB5 413 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 CYB5R4Q7L1T6 521 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 ZBTB33Q86T24 672 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 LINC01599Q8WXQ3 324 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 GPKOWQ92917 476 aaPredicted RBP eCLIP14.07□□□□□ -0.16
DDX54-206ENST00000549271 MAP4K1Q92918 833 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 RMDN1Q96DB5 314 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 USP26Q9BXU7 913 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 BCAS3Q9H6U6 928 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 RIOX1Q9H6W3 641 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 SORCS3Q9UPU3 1222 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 PCDHA1Q9Y5I3 950 aa14.07□□□□□ -0.16
DDX54-206ENST00000549271 BAZ2BQ9UIF8 2168 aaKnown RBP14.06□□□□□ -0.16
DDX54-206ENST00000549271 FNDC1Q4ZHG4 1894 aaPredicted RBP14.06□□□□□ -0.16
DDX54-206ENST00000549271 MYCLP12524 364 aaPredicted RBP14.06□□□□□ -0.16
DDX54-206ENST00000549271 GRM4Q14833 912 aa14.06□□□□□ -0.16
DDX54-206ENST00000549271 DUSP6Q16828 381 aa14.06□□□□□ -0.16
DDX54-206ENST00000549271 IL31RAQ8NI17 732 aa14.06□□□□□ -0.16
DDX54-206ENST00000549271 NEK1Q96PY6 1258 aa14.06□□□□□ -0.16
DDX54-206ENST00000549271 CDCA3Q99618 268 aaPredicted RBP14.06□□□□□ -0.16
DDX54-206ENST00000549271 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
DDX54-206ENST00000549271 CEP250Q9BV73 2442 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 CLCN5P51795 746 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 ARHGAP4P98171 946 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 UBE3AQ05086 875 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 TRDNQ13061 729 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 PGM5Q15124 567 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 SLC35G1Q2M3R5 365 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 FBXO47Q5MNV8 452 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 SYCE2Q6PIF2 218 aa14.05□□□□□ -0.16
DDX54-206ENST00000549271 RTN4RL1Q86UN2 441 aaPredicted RBP14.05□□□□□ -0.16
DDX54-206ENST00000549271 LSG1Q9H089 658 aaKnown RBP14.05□□□□□ -0.16
DDX54-206ENST00000549271 E7EWF7 191 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 GCOM1H8Y6P7 765 aaPredicted RBP14.04□□□□□ -0.16
DDX54-206ENST00000549271 POLR2MP0CAP2 368 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 TROAPQ12815 778 aa14.04□□□□□ -0.16
DDX54-206ENST00000549271 PAN2Q504Q3 1202 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms