RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ESYT2A0FGR8 921 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 C19orf67A6NJJ6 358 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 H3BQ06 376 aaPredicted RBP17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 LGR5O75473 907 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 F2P00734 622 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 ZNF200P98182 395 aaPredicted RBP17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 ZP2Q05996 745 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 XRRA1Q6P2D8 792 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 C7orf31Q8N865 590 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 IL31RAQ8NI17 732 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 ZMYND12Q9H0C1 365 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 PCDHA6Q9UN73 950 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 PCDHA8Q9Y5H6 950 aa17.97■□□□□ 0.47
CHMP1A-206ENST00000549139 SPDYE3A6NKU9 549 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 CDKL5O76039 1030 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 RGS20O76081 388 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 DEXIO95424 95 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 FOSP01100 380 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 HOXD8P13378 290 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 ADCY7P51828 1080 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 MRPS9P82933 396 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 MFSD10Q14728 455 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 UBE2SQ16763 222 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 ME3Q16798 604 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 KIAA0753Q2KHM9 967 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 EPC2Q52LR7 807 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 PCNX4Q63HM2 1172 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 DBF4BQ8NFT6 615 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 ALG1Q9BT22 464 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 SH3GLB2Q9NR46 395 aa17.96■□□□□ 0.47
CHMP1A-206ENST00000549139 DOCK5Q9H7D0 1870 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 H3BNC9 293 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 PPFIA3O75145 1194 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 TGFB3P10600 412 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 GNA11P29992 359 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 CLK2P49760 499 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 TIGD5Q53EQ6 642 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 PPTC7Q8NI37 304 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 KATNAL1Q9BW62 490 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 EHMT1Q9H9B1 1298 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 C6orf50Q9HD87 102 aa17.95■□□□□ 0.46
CHMP1A-206ENST00000549139 COL4A6Q14031 1691 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 USP34Q70CQ2 3546 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 AMHP03971 560 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 ICAM3P32942 547 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 AP3B2Q13367 1082 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 PTPROQ16827 1216 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 PLEKHG4Q58EX7 1191 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 TCEAL5Q5H9L2 206 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 MCTP2Q6DN12 878 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 FAM177A1Q8N128 213 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 CCDC148Q8NFR7 591 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 SAMD11Q96NU1 681 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 INPP4AQ96PE3 977 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 PRKAG3Q9UGI9 489 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 LIMCH1Q9UPQ0 1083 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 MRVI1Q9Y6F6 885 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 EMSYQ7Z589 1322 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 ATG2AQ2TAZ0 1938 aa17.94■□□□□ 0.46
CHMP1A-206ENST00000549139 NLRC5Q86WI3 1866 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 LARGE1O95461 756 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 LAMC2Q13753 1193 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 RABEP1Q15276 862 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 GNPTABQ3T906 1256 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 SERINC5Q86VE9 423 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 GTF3C6Q969F1 213 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 ZFP91Q96JP5 570 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 RTEL1Q9NZ71 1219 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 STK36Q9NRP7 1315 aa17.93■□□□□ 0.46
CHMP1A-206ENST00000549139 CTDNEP1O95476 244 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 LTBRP36941 435 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 GPM6BQ13491 265 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 HFE2Q6ZVN8 426 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 NLRX1Q86UT6 975 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 ADHFE1Q8IWW8 467 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 NECAB1Q8N987 351 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 BICD2Q8TD16 824 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 TOP1MTQ969P6 601 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 TBC1D32Q96NH3 1257 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 ANO3Q9BYT9 981 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 OSBPL7Q9BZF2 842 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 NSUN3Q9H649 340 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 VPS54Q9P1Q0 977 aa17.92■□□□□ 0.46
CHMP1A-206ENST00000549139 RSPH10B2B2RC85 870 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 SPATA31C2B4DYI2 1134 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 PPFIA4O75335 1185 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 RSPH10BP0C881 870 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 HOXC8P31273 242 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 TMEM192Q8IY95 271 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 TMEM260Q9NX78 707 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 UBIAD1Q9Y5Z9 338 aa17.91■□□□□ 0.46
CHMP1A-206ENST00000549139 ZFHX2Q9C0A1 2572 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms