RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 FAM160A1Q05DH4 1040 aa19.56■□□□□ 0.72
HDAC7-227ENST00000548080 SNX17Q15036 470 aa19.56■□□□□ 0.72
HDAC7-227ENST00000548080 PPP4R3AQ6IN85 833 aa19.56■□□□□ 0.72
HDAC7-227ENST00000548080 ENGASEQ8NFI3 743 aa19.56■□□□□ 0.72
HDAC7-227ENST00000548080 SDF4Q9BRK5 362 aa19.56■□□□□ 0.72
HDAC7-227ENST00000548080 JPH1Q9HDC5 661 aaPredicted RBP19.56■□□□□ 0.72
HDAC7-227ENST00000548080 SLC9A2Q9UBY0 812 aa19.56■□□□□ 0.72
HDAC7-227ENST00000548080 A0A1B0GVL5 298 aa19.55■□□□□ 0.72
HDAC7-227ENST00000548080 GSTTP1A0A1W2PQM5 241 aa19.55■□□□□ 0.72
HDAC7-227ENST00000548080 ARVCFO00192 962 aa19.55■□□□□ 0.72
HDAC7-227ENST00000548080 DHX15O43143 795 aaKnown RBP19.55■□□□□ 0.72
HDAC7-227ENST00000548080 GCFC2P16383 781 aaKnown RBP19.55■□□□□ 0.72
HDAC7-227ENST00000548080 SETQ01105 290 aaPredicted RBP19.55■□□□□ 0.72
HDAC7-227ENST00000548080 GRIN1Q05586 938 aa19.55■□□□□ 0.72
HDAC7-227ENST00000548080 ZSCAN23Q3MJ62 389 aa19.55■□□□□ 0.72
HDAC7-227ENST00000548080 FAM47CQ5HY64 1035 aa19.55■□□□□ 0.72
HDAC7-227ENST00000548080 GIMAP8Q8ND71 665 aaPredicted RBP19.55■□□□□ 0.72
HDAC7-227ENST00000548080 DDX25Q9UHL0 483 aaKnown RBP19.55■□□□□ 0.72
HDAC7-227ENST00000548080 NFASCO94856 1347 aa19.55■□□□□ 0.72
HDAC7-227ENST00000548080 FAM237AA0A1B0GTK4 181 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 NEMFO60524 1076 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 CCNE2O96020 404 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 HOXD8P13378 290 aaPredicted RBP19.54■□□□□ 0.72
HDAC7-227ENST00000548080 TCF7P36402 384 aaPredicted RBP19.54■□□□□ 0.72
HDAC7-227ENST00000548080 PRPHP41219 470 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 PSEN2P49810 448 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 NDUFA8P51970 172 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 SNW1Q13573 536 aaKnown RBP19.54■□□□□ 0.72
HDAC7-227ENST00000548080 SH3RF1Q7Z6J0 888 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 C16orf70Q9BSU1 422 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 CSRNP2Q9H175 543 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 TMEM60Q9H2L4 133 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 PRDM5Q9NQX1 630 aaPredicted RBP19.54■□□□□ 0.72
HDAC7-227ENST00000548080 CYP3A7-CYP3A51PA0A087WV96 503 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 H0YGN5 161 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 KPNA6O60684 536 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 PPFIA4O75335 1185 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 LETM1O95202 739 aaPredicted RBP19.54■□□□□ 0.72
HDAC7-227ENST00000548080 PFKFB1P16118 471 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 CYP3A7P24462 503 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 CDK7P50613 346 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 ACTR2P61160 394 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 MFSD10Q14728 455 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 KIAA0753Q2KHM9 967 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 Q4G0T1 1027 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 MOXD1Q6UVY6 613 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 FMR1NBQ8N0W7 255 aaPredicted RBP19.54■□□□□ 0.72
HDAC7-227ENST00000548080 MBOAT7Q96N66 472 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 TRPV6Q9H1D0 765 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 NUP62CLQ9H1M0 184 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 CLSTN2Q9H4D0 955 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 FAM13BQ9NYF5 915 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 HPSEQ9Y251 543 aa19.54■□□□□ 0.72
HDAC7-227ENST00000548080 VWA3AA6NCI4 1184 aa19.53■□□□□ 0.72
HDAC7-227ENST00000548080 CHMP2AO43633 222 aa19.53■□□□□ 0.72
HDAC7-227ENST00000548080 KINO60870 393 aaKnown RBP19.53■□□□□ 0.72
HDAC7-227ENST00000548080 OR52Z1P0C646 297 aa19.53■□□□□ 0.72
HDAC7-227ENST00000548080 IL17AQ16552 155 aa19.53■□□□□ 0.72
HDAC7-227ENST00000548080 DTHD1Q6ZMT9 781 aa19.53■□□□□ 0.72
HDAC7-227ENST00000548080 SLC43A3Q8NBI5 491 aa19.53■□□□□ 0.72
HDAC7-227ENST00000548080 SEPT1Q8WYJ6 367 aa19.53■□□□□ 0.72
HDAC7-227ENST00000548080 TRMT13Q9NUP7 481 aaKnown RBP19.53■□□□□ 0.72
HDAC7-227ENST00000548080 RBAK-RBAKDNI3L0D1 243 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 F2P00734 622 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 MARK3P27448 753 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 LONP1P36776 959 aaKnown RBP19.52■□□□□ 0.72
HDAC7-227ENST00000548080 SPECC1Q5M775 1068 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 LRCH2Q5VUJ6 765 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 ETNPPLQ8TBG4 499 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 SLC5A5Q92911 643 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 PCYT2Q99447 389 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 PDLIM7Q9NR12 457 aa19.52■□□□□ 0.72
HDAC7-227ENST00000548080 TRIP12Q14669 1992 aaPredicted RBP19.51■□□□□ 0.71
HDAC7-227ENST00000548080 B4GALT4O60513 344 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 GAS7O60861 476 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 ZNF202O95125 648 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 SYKP43405 635 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 ZNF445P59923 1031 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 FAAP100Q0VG06 881 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 GSE1Q14687 1217 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 CALCRLQ16602 461 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 C1orf53Q5VUE5 145 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 FAM126BQ8IXS8 530 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 UNC45AQ9H3U1 944 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 TBC1D22BQ9NU19 505 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 HDAC6Q9UBN7 1215 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 KCNH3Q9ULD8 1083 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 NR2E3Q9Y5X4 410 aa19.51■□□□□ 0.71
HDAC7-227ENST00000548080 SYCE3A1L190 88 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 TRIM43BA6NCK2 446 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 DCDC2CA8MYV0 355 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 H3BRB1 525 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 HAS3O00219 553 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 ZNF200P98182 395 aaPredicted RBP19.5■□□□□ 0.71
HDAC7-227ENST00000548080 HIC1Q14526 733 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 ANKRD33Q7Z3H0 272 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 GLG1Q92896 1179 aa19.5■□□□□ 0.71
HDAC7-227ENST00000548080 TRIM43Q96BQ3 446 aaPredicted RBP19.5■□□□□ 0.71
HDAC7-227ENST00000548080 MTMR9Q96QG7 549 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms