RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 STK24Q9Y6E0 443 aa19.69■□□□□ 0.74
CD9-211ENST00000546073 POTEB3A0JP26 581 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 FAM205CA6NFA0 338 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 LAD1O00515 517 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 KIAA0355O15063 1070 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 HBP1O60381 514 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 PSMD10O75832 226 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 BMP15O95972 392 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 NCAPH2Q6IBW4 605 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 POTEBQ6S5H4 581 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 TRIM50Q86XT4 487 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 ETNPPLQ8TBG4 499 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 CAGE1Q8TC20 777 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 AFAP1L1Q8TED9 768 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 UNC45AQ9H3U1 944 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 ZSCAN16Q9H4T2 348 aaPredicted RBP19.68■□□□□ 0.74
CD9-211ENST00000546073 KCNMB3Q9NPA1 279 aa19.68■□□□□ 0.74
CD9-211ENST00000546073 TRMT13Q9NUP7 481 aaKnown RBP19.68■□□□□ 0.74
CD9-211ENST00000546073 CCNE2O96020 404 aa19.67■□□□□ 0.74
CD9-211ENST00000546073 TIMP1P01033 207 aa19.67■□□□□ 0.74
CD9-211ENST00000546073 OR52Z1P0C646 297 aa19.67■□□□□ 0.74
CD9-211ENST00000546073 SYT1P21579 422 aa19.67■□□□□ 0.74
CD9-211ENST00000546073 PTK7Q13308 1070 aa19.67■□□□□ 0.74
CD9-211ENST00000546073 CCDC43Q96MW1 224 aaKnown RBP19.67■□□□□ 0.74
CD9-211ENST00000546073 PPP1R12CQ9BZL4 782 aa19.67■□□□□ 0.74
CD9-211ENST00000546073 TTC12Q9H892 705 aaPredicted RBP19.67■□□□□ 0.74
CD9-211ENST00000546073 GRIN2DO15399 1336 aa19.67■□□□□ 0.74
CD9-211ENST00000546073 STX6O43752 255 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 PARNO95453 639 aaKnown RBP19.66■□□□□ 0.74
CD9-211ENST00000546073 CD4P01730 458 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 IGBP1P78318 339 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 PPP2R5CQ13362 524 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 ZNF484Q5JVG2 852 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 TRMT1LQ7Z2T5 733 aaKnown RBP19.66■□□□□ 0.74
CD9-211ENST00000546073 RPUSD2Q8IZ73 545 aaKnown RBP19.66■□□□□ 0.74
CD9-211ENST00000546073 SPRYD3Q8NCJ5 442 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 BBXQ8WY36 941 aaPredicted RBP19.66■□□□□ 0.74
CD9-211ENST00000546073 RNPEPQ9H4A4 650 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 SETD4Q9NVD3 440 aa19.66■□□□□ 0.74
CD9-211ENST00000546073 KIF28PB7ZC32 967 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 M0QZ92 97 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 P4HBP07237 508 aaKnown RBP19.65■□□□□ 0.74
CD9-211ENST00000546073 PSMC5P62195 406 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 FPGSQ05932 587 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 PPIGQ13427 754 aaKnown RBP eCLIP19.65■□□□□ 0.74
CD9-211ENST00000546073 EPHA7Q15375 998 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 GRIK4Q16099 956 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 GDF6Q6KF10 455 aaPredicted RBP19.65■□□□□ 0.74
CD9-211ENST00000546073 TAF2Q6P1X5 1199 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 OTUD6AQ7L8S5 288 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 EXOC8Q8IYI6 725 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 NEK9Q8TD19 979 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 ATP8B4Q8TF62 1192 aa19.65■□□□□ 0.74
CD9-211ENST00000546073 UBE2OQ9C0C9 1292 aaKnown RBP19.65■□□□□ 0.74
CD9-211ENST00000546073 IGKV6D-21A0A0A0MT36 114 aa19.64■□□□□ 0.73
CD9-211ENST00000546073 EDIL3O43854 480 aa19.64■□□□□ 0.73
CD9-211ENST00000546073 CYP2C9P11712 490 aa19.64■□□□□ 0.73
CD9-211ENST00000546073 TMOD1P28289 359 aa19.64■□□□□ 0.73
CD9-211ENST00000546073 QARSP47897 775 aaKnown RBP19.64■□□□□ 0.73
CD9-211ENST00000546073 MDM2Q00987 491 aaPredicted RBP19.64■□□□□ 0.73
CD9-211ENST00000546073 PLCB4Q15147 1175 aa19.64■□□□□ 0.73
CD9-211ENST00000546073 MFSD5Q6N075 450 aa19.64■□□□□ 0.73
CD9-211ENST00000546073 DTHD1Q6ZMT9 781 aa19.64■□□□□ 0.73
CD9-211ENST00000546073 CCDC60Q8IWA6 550 aaPredicted RBP19.64■□□□□ 0.73
CD9-211ENST00000546073 MTIF3Q9H2K0 278 aaKnown RBP19.64■□□□□ 0.73
CD9-211ENST00000546073 MAFBQ9Y5Q3 323 aaPredicted RBP19.64■□□□□ 0.73
CD9-211ENST00000546073 COL1A2P08123 1366 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 TRIM43BA6NCK2 446 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 PITPNM1O00562 1244 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 INSRRP14616 1297 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 XKR3Q5GH77 459 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 HAUS3Q68CZ6 603 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 SH3RF1Q7Z6J0 888 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 FERMT3Q86UX7 667 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 PPP1R13LQ8WUF5 828 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 HAS1Q92839 578 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 BADQ92934 168 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 GJA10Q969M2 543 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 TRIM43Q96BQ3 446 aaPredicted RBP19.63■□□□□ 0.73
CD9-211ENST00000546073 JPH2Q9BR39 696 aaPredicted RBP19.63■□□□□ 0.73
CD9-211ENST00000546073 ZSWIM4Q9H7M6 989 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 TUBE1Q9UJT0 475 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 TBX21Q9UL17 535 aa19.63■□□□□ 0.73
CD9-211ENST00000546073 DDX11L8A8MPP1 907 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 MAGEB2O15479 319 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 CAND2O75155 1236 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 OATP04181 439 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 RFC2P35250 354 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 ANP32AP39687 249 aaKnown RBP19.62■□□□□ 0.73
CD9-211ENST00000546073 THPOP40225 353 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 TECP42680 631 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 PTGDRQ13258 359 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 TPH2Q8IWU9 490 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 ZNF396Q96N95 335 aaPredicted RBP19.62■□□□□ 0.73
CD9-211ENST00000546073 PCYT2Q99447 389 aa19.62■□□□□ 0.73
CD9-211ENST00000546073 SEPT9Q9UHD8 586 aaPredicted RBP19.62■□□□□ 0.73
CD9-211ENST00000546073 ACTN1P12814 892 aa19.61■□□□□ 0.73
CD9-211ENST00000546073 PRPHP41219 470 aa19.61■□□□□ 0.73
CD9-211ENST00000546073 MAGEA10P43363 369 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms