RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 CDC25AP30304 524 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 RPS6KA2Q15349 733 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 DIXDC1Q155Q3 683 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 SULF1Q8IWU6 871 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 MINPP1Q9UNW1 487 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 UTYO14607 1347 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 TTBK2Q6IQ55 1244 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 BARHL2Q9NY43 387 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 MROH7-TTC4A0A0A0MT08 1334 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 KCNB1Q14721 858 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 MORC4Q8TE76 937 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 EEF2KMTQ96G04 330 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 RASGRF2O14827 1237 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 LRRN2O75325 713 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 CAV1Q03135 178 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 BRINP3Q76B58 766 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 CEP120Q8N960 986 aa13.52□□□□□ -0.24
COL4A6-209ENST00000545689 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.25
COL4A6-209ENST00000545689 TXNDC9O14530 226 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 KPNA2P52292 529 aaKnown RBP13.52□□□□□ -0.25
COL4A6-209ENST00000545689 GRM1Q13255 1194 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 DCP1AQ9NPI6 582 aaPredicted RBP13.52□□□□□ -0.25
COL4A6-209ENST00000545689 TTLL3Q9Y4R7 772 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 FRMPD1Q5SYB0 1578 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 MYO3AQ8NEV4 1616 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 PRELPP51888 382 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 ATP2C1P98194 919 aaPredicted RBP13.52□□□□□ -0.25
COL4A6-209ENST00000545689 IFT88Q13099 833 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 RTKN2Q8IZC4 609 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 NME8Q8N427 588 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 UHMK1Q8TAS1 419 aaKnown RBP13.52□□□□□ -0.25
COL4A6-209ENST00000545689 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 AFG3L2Q9Y4W6 797 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 NEXMIFQ5QGS0 1516 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
COL4A6-209ENST00000545689 SCYL1Q96KG9 808 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 PCIF1Q9H4Z3 704 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 MID2Q9UJV3 735 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 MAD1L1Q9Y6D9 718 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 PTPRMP28827 1452 aa13.52□□□□□ -0.25
COL4A6-209ENST00000545689 ZC3H13Q5T200 1668 aaKnown RBP13.52□□□□□ -0.25
COL4A6-209ENST00000545689 ARHGEF37A1IGU5 675 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 CPP00450 1065 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 SEPT10Q9P0V9 454 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 PCDHA6Q9UN73 950 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 PCDHA8Q9Y5H6 950 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 KRT39Q6A163 491 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 EFCC1Q9HA90 598 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
COL4A6-209ENST00000545689 CTNND1O60716 968 aaKnown RBP13.51□□□□□ -0.25
COL4A6-209ENST00000545689 CDC27P30260 824 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 UBXN2AP68543 259 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 ABCB11O95342 1321 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 CLRN2A0PK11 232 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 KRT3P12035 628 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 PRCPP42785 496 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 CYP27A1Q02318 531 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 CC2D1AQ6P1N0 951 aaPredicted RBP13.51□□□□□ -0.25
COL4A6-209ENST00000545689 GUF1Q8N442 669 aaKnown RBP13.51□□□□□ -0.25
COL4A6-209ENST00000545689 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 FEM1BQ9UK73 627 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 INO80Q9ULG1 1556 aaPredicted RBP13.51□□□□□ -0.25
COL4A6-209ENST00000545689 GSG1L2A8MUP6 293 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 ZMYND10O75800 440 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 CXCR5P32302 372 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 PTPN21Q16825 1174 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 TCP11Q8WWU5 503 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 HVCN1Q96D96 273 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
COL4A6-209ENST00000545689 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 COASYQ13057 564 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 NR1H3Q13133 447 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 CFAP61Q8NHU2 1237 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 OATP04181 439 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 CLTAP09496 248 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 RSPH3Q86UC2 560 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 ATP8B3O60423 1300 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 NR3C1P04150 777 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 ARL4AP40617 200 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 TMED2Q15363 201 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 CAPN12Q6ZSI9 719 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 SNX25Q9H3E2 840 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.5□□□□□ -0.25
COL4A6-209ENST00000545689 TBC1D22BQ9NU19 505 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 USP17L5A8MUK1 530 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 PDE1BQ01064 536 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 DBN1Q16643 649 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 BBS5Q8N3I7 341 aa13.5□□□□□ -0.25
COL4A6-209ENST00000545689 GIMAP8Q8ND71 665 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-209ENST00000545689 MCPH1Q8NEM0 835 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms