RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PSME4Q14997 1843 aa13.7□□□□□ -0.22
PAAF1-215ENST00000544909 BRWD3Q6RI45 1802 aa13.7□□□□□ -0.22
PAAF1-215ENST00000544909 PDE2AO00408 941 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 NKRFO15226 690 aaKnown RBP eCLIP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 TRIM37O94972 964 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 AFPP02771 609 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 SSBP05455 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 ACTN2P35609 894 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 APBA1Q02410 837 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 KCNH2Q12809 1159 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 MYBPC2Q14324 1141 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 LRRC41Q15345 812 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 PRR16Q569H4 304 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 RBM26Q5T8P6 1007 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 VPS36Q86VN1 386 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 CAVIN3Q969G5 261 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 LSM14BQ9BX40 385 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 TLR10Q9BXR5 811 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 STIM2Q9P246 746 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 A0A0A6YYK5 440 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 LRRIQ3A6PVS8 624 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 ECE2O60344 883 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 TLR2O60603 784 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 TBCAO75347 108 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 TFRCP02786 760 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 EPB41P11171 864 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 RFX1P22670 979 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 POLR2FP61218 127 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 ASIC2Q16515 512 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 FKBP1CQ5VVH2 108 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 SH3BP5LQ7L8J4 393 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 COL23A1Q86Y22 540 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 NEK9Q8TD19 979 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 CCDC102AQ96A19 550 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 CALR3Q96L12 384 aaKnown RBP13.69□□□□□ -0.22
PAAF1-215ENST00000544909 TSPYL1Q9H0U9 437 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 ARHGEF10LQ9HCE6 1279 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 ODF2LQ9ULJ1 636 aa13.69□□□□□ -0.22
PAAF1-215ENST00000544909 ZC3H4Q9UPT8 1303 aaKnown RBP13.68□□□□□ -0.22
PAAF1-215ENST00000544909 A0A0U1RQG5 324 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-215ENST00000544909 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 H0YIN7 160 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 FLOT1O75955 427 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 MOCS3O95396 460 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 MMP10P09238 476 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 POTEIP0CG38 1075 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 STAT2P52630 851 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-215ENST00000544909 KLHL30Q0D2K2 578 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 EXOC3L4Q17RC7 722 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 KLHDC7AQ5VTJ3 777 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 ALS2CLQ60I27 953 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 LEKR1Q6ZMV7 388 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-215ENST00000544909 VTI1AQ96AJ9 217 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 CAPZA3Q96KX2 299 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 HSD17B14Q9BPX1 270 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 REEP2Q9BRK0 252 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 SELENOOQ9BVL4 669 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 WDR11Q9BZH6 1224 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 VPS18Q9P253 973 aa13.68□□□□□ -0.22
PAAF1-215ENST00000544909 IGLV3-22A0A075B6J6 115 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 FAM86B1E9PN63 330 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 MSH4O15457 936 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 FAM86B2P0C5J1 330 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 UCHL3P15374 230 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 ZNF131P52739 623 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 NPEPPSP55786 919 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 ZFPM1Q8IX07 1006 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 C1orf131Q8NDD1 294 aaKnown RBP13.67□□□□□ -0.22
PAAF1-215ENST00000544909 MLXIPQ9HAP2 919 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 ZCCHC17Q9NP64 241 aaKnown RBP13.67□□□□□ -0.22
PAAF1-215ENST00000544909 TMOD2Q9NZR1 351 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
PAAF1-215ENST00000544909 PRPF6O94906 941 aaKnown RBP13.67□□□□□ -0.22
PAAF1-215ENST00000544909 CCDC172P0C7W6 258 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 RASSF7Q02833 373 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 ALCAMQ13740 583 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 ZSCAN26Q16670 478 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 MEI1Q5TIA1 1274 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 DPY19L2P1Q6NXN4 242 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 FAM160B2Q86V87 743 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 SFR1Q86XK3 245 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 MREGQ8N565 214 aa13.67□□□□□ -0.22
PAAF1-215ENST00000544909 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms