RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 ZNF302Q9NR11 478 aa17.24■□□□□ 0.35
PDCD2-212ENST00000544755 COL1A2P08123 1366 aa17.24■□□□□ 0.35
PDCD2-212ENST00000544755 TRIP12Q14669 1992 aaPredicted RBP17.23■□□□□ 0.35
PDCD2-212ENST00000544755 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
PDCD2-212ENST00000544755 MARCH6O60337 910 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 CCNE2O96020 404 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 CYP2C9P11712 490 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 CYP2C18P33260 490 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 TRAPPC10P48553 1259 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 PPFIA1Q13136 1202 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 NR5A1Q13285 461 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 LRIT3Q3SXY7 679 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 RSPH3Q86UC2 560 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 ETNPPLQ8TBG4 499 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 RNPEPQ9H4A4 650 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 IL23AQ9NPF7 189 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 SMC3Q9UQE7 1217 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
PDCD2-212ENST00000544755 TRIOBPQ9H2D6 2365 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 EDIL3O43854 480 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 HBP1O60381 514 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 DKC1O60832 514 aaKnown RBP eCLIP17.22■□□□□ 0.35
PDCD2-212ENST00000544755 PSMD10O75832 226 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 SELPP16109 830 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 ITGB8P26012 769 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 LMBR1Q8WVP7 490 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 DISC1Q9NRI5 854 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 NOL7Q9UMY1 257 aaKnown RBP17.22■□□□□ 0.35
PDCD2-212ENST00000544755 TRPC6Q9Y210 931 aa17.22■□□□□ 0.35
PDCD2-212ENST00000544755 POTEB3A0JP26 581 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 ACTN1P12814 892 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 CSF2RAP15509 400 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 PDCP20941 246 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 ADAM17P78536 824 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 GRIK4Q16099 956 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 POTEBQ6S5H4 581 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
PDCD2-212ENST00000544755 LRRC8DQ7L1W4 858 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 RPAINQ86UA6 219 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 BBXQ8WY36 941 aaPredicted RBP17.21■□□□□ 0.35
PDCD2-212ENST00000544755 PCYT2Q99447 389 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 WNT8AQ9H1J5 351 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 TUBE1Q9UJT0 475 aa17.21■□□□□ 0.35
PDCD2-212ENST00000544755 MAFBQ9Y5Q3 323 aaPredicted RBP17.21■□□□□ 0.35
PDCD2-212ENST00000544755 MBLAC1A4D2B0 266 aaPredicted RBP17.2■□□□□ 0.34
PDCD2-212ENST00000544755 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
PDCD2-212ENST00000544755 CKBP12277 381 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 U2AF2P26368 475 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDCD2-212ENST00000544755 PPP2R5CQ13362 524 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 CUL4AQ13619 759 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 ZNF484Q5JVG2 852 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 SWSAP1Q6NVH7 229 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 MIER3Q7Z3K6 550 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 NOSTRINQ8IVI9 506 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 CCDC60Q8IWA6 550 aaPredicted RBP17.2■□□□□ 0.34
PDCD2-212ENST00000544755 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
PDCD2-212ENST00000544755 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 SETD4Q9NVD3 440 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 IGSF9BQ9UPX0 1349 aa17.2■□□□□ 0.34
PDCD2-212ENST00000544755 H3BQV1 296 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 SLC37A4O43826 429 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 NEMFO60524 1076 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 EFCAB14O75071 495 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 MARK3P27448 753 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 GJB2P29033 226 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 FOSBP53539 338 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 CCL23P55773 120 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 CALCRLQ16602 461 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 B3GNT9Q6UX72 402 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 CKAP2LQ8IYA6 745 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 SNX21Q969T3 373 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 RNPC3Q96LT9 517 aaKnown RBP17.19■□□□□ 0.34
PDCD2-212ENST00000544755 NRBP2Q9NSY0 501 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 TELO2Q9Y4R8 837 aa17.19■□□□□ 0.34
PDCD2-212ENST00000544755 TREHO43280 583 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 FGBP02675 491 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 INSRRP14616 1297 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 THPOP40225 353 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 SHHQ15465 462 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
PDCD2-212ENST00000544755 EARS2Q5JPH6 523 aaKnown RBP17.18■□□□□ 0.34
PDCD2-212ENST00000544755 DHX38Q92620 1227 aaKnown RBP17.18■□□□□ 0.34
PDCD2-212ENST00000544755 UNC45AQ9H3U1 944 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 GABBR1Q9UBS5 961 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 UMODL1Q5DID0 1318 aa17.18■□□□□ 0.34
PDCD2-212ENST00000544755 RSPH10B2B2RC85 870 aa17.17■□□□□ 0.34
PDCD2-212ENST00000544755 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
PDCD2-212ENST00000544755 MAGEB2O15479 319 aa17.17■□□□□ 0.34
PDCD2-212ENST00000544755 CHMP2AO43633 222 aa17.17■□□□□ 0.34
PDCD2-212ENST00000544755 DTNBO60941 627 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms