RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 ZSWIM4Q9H7M6 989 aa13.4□□□□□ -0.26
CCDC189-208ENST00000544613 MRPL44Q9H9J2 332 aaKnown RBP13.4□□□□□ -0.26
CCDC189-208ENST00000544613 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
CCDC189-208ENST00000544613 CEP72Q9P209 647 aa13.4□□□□□ -0.26
CCDC189-208ENST00000544613 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
CCDC189-208ENST00000544613 TCEAL9Q9UHQ7 104 aa13.4□□□□□ -0.26
CCDC189-208ENST00000544613 DBR1Q9UK59 544 aaKnown RBP13.4□□□□□ -0.26
CCDC189-208ENST00000544613 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC189-208ENST00000544613 SHTN1A0MZ66 631 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 CTAGE9A4FU28 777 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 RASSF10A6NK89 507 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 RNF225M0QZC1 329 aaPredicted RBP13.39□□□□□ -0.27
CCDC189-208ENST00000544613 KRT86O43790 486 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCDC189-208ENST00000544613 STAM2O75886 525 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 ARP10275 920 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 ALAS1P13196 640 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 PTPRAP18433 802 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 SFNP31947 248 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 JAK3P52333 1124 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 SNRPFP62306 86 aaKnown RBP13.39□□□□□ -0.27
CCDC189-208ENST00000544613 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 MTMR2Q13614 643 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 NBPF12Q5TAG4 269 aaPredicted RBP13.39□□□□□ -0.27
CCDC189-208ENST00000544613 WDR59Q6PJI9 974 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 SFR1Q86XK3 245 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 TPH2Q8IWU9 490 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 RBM46Q8TBY0 533 aaKnown RBP13.39□□□□□ -0.27
CCDC189-208ENST00000544613 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 MKNK1Q9BUB5 465 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 UNC45AQ9H3U1 944 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 ZHX3Q9H4I2 956 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 AGO4Q9HCK5 861 aaKnown RBP13.39□□□□□ -0.27
CCDC189-208ENST00000544613 GPRC5DQ9NZD1 345 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 MYO6Q9UM54 1294 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 PCDHB13Q9Y5F0 798 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 MRFAP1Q9Y605 127 aa13.39□□□□□ -0.27
CCDC189-208ENST00000544613 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 SSU72P8A0A1W2PR75 194 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 VWA5AO00534 786 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 LCA5LO95447 670 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 EGFRP00533 1210 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 ITGB5P18084 799 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 LMNB1P20700 586 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 NR2F2P24468 414 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 ANXA13P27216 316 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 DSG3P32926 999 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 EPS15P42566 896 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 KRT76Q01546 638 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 RASSF7Q02833 373 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 SPP2Q13103 211 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 CTTNQ14247 550 aaKnown RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 COG2Q14746 738 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 R3HDM1Q15032 1099 aaKnown RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 SPA17Q15506 151 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 MIER3Q7Z3K6 550 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 FMNL3Q8IVF7 1028 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 CEP112Q8N8E3 955 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 UBXN4Q92575 508 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 CDHR1Q96JP9 859 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 CCDC42Q96M95 316 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 WRNIP1Q96S55 665 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 CHP1Q99653 195 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 NAPGQ99747 312 aaPredicted RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 MMRN2Q9H8L6 949 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 RAVER2Q9HCJ3 691 aaKnown RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 LUC7LQ9NQ29 371 aaKnown RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 LZTFL1Q9NQ48 299 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 KCNH7Q9NS40 1196 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 RGL1Q9NZL6 768 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
CCDC189-208ENST00000544613 ARMCX3Q9UH62 379 aaPredicted RBP13.38□□□□□ -0.27
CCDC189-208ENST00000544613 GTPBP10A4D1E9 387 aaKnown RBP13.37□□□□□ -0.27
CCDC189-208ENST00000544613 NFIBO00712 420 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 USO1O60763 962 aaKnown RBP13.37□□□□□ -0.27
CCDC189-208ENST00000544613 EPB41P11171 864 aaKnown RBP13.37□□□□□ -0.27
CCDC189-208ENST00000544613 TAL1P17542 331 aaPredicted RBP13.37□□□□□ -0.27
CCDC189-208ENST00000544613 ARHGAP25P42331 645 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
CCDC189-208ENST00000544613 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
CCDC189-208ENST00000544613 MTMR1Q13613 665 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 SH3D19Q5HYK7 790 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
CCDC189-208ENST00000544613 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 NELFCDQ8IXH7 590 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 GPRASP2Q96D09 838 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 KLRG1Q96E93 195 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 WDR24Q96S15 920 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 IWS1Q96ST2 819 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
CCDC189-208ENST00000544613 LXNQ9BS40 222 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms