RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 BMP8BP34820 402 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 RBL2Q08999 1139 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
COPS7A-216ENST00000543170 CAGE1Q8TC20 777 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 PPP1R13LQ8WUF5 828 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 HAS1Q92839 578 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 UIMC1Q96RL1 719 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 UNC45AQ9H3U1 944 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 ZNF302Q9NR11 478 aa20.76■□□□□ 0.91
COPS7A-216ENST00000543170 NOL7Q9UMY1 257 aaKnown RBP20.76■□□□□ 0.91
COPS7A-216ENST00000543170 ADAM17P78536 824 aa20.75■□□□□ 0.91
COPS7A-216ENST00000543170 PTK7Q13308 1070 aa20.75■□□□□ 0.91
COPS7A-216ENST00000543170 PPP2R5CQ13362 524 aa20.75■□□□□ 0.91
COPS7A-216ENST00000543170 LARP1BQ659C4 914 aaKnown RBP20.75■□□□□ 0.91
COPS7A-216ENST00000543170 CCDC155Q8N6L0 562 aa20.75■□□□□ 0.91
COPS7A-216ENST00000543170 RNPEPQ9H4A4 650 aa20.75■□□□□ 0.91
COPS7A-216ENST00000543170 DISC1Q9NRI5 854 aa20.75■□□□□ 0.91
COPS7A-216ENST00000543170 VAV3Q9UKW4 847 aa20.75■□□□□ 0.91
COPS7A-216ENST00000543170 MAFBQ9Y5Q3 323 aaPredicted RBP20.75■□□□□ 0.91
COPS7A-216ENST00000543170 WNT7AO00755 349 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 BACH1O14867 736 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 BAG4O95429 457 aaKnown RBP20.74■□□□□ 0.91
COPS7A-216ENST00000543170 CYP2C9P11712 490 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 MARK3P27448 753 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 BFSP2Q13515 415 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 MFSD5Q6N075 450 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 CHRDL2Q6WN34 429 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 LMBR1Q8WVP7 490 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 BADQ92934 168 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 GJA10Q969M2 543 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 SAMM50Q9Y512 469 aa20.74■□□□□ 0.91
COPS7A-216ENST00000543170 A0A1W2PPC1 479 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 MDM2Q00987 491 aaPredicted RBP20.73■□□□□ 0.91
COPS7A-216ENST00000543170 PPFIA1Q13136 1202 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 HIC1Q14526 733 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 PLCB4Q15147 1175 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 CALCRLQ16602 461 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 TTC38Q5R3I4 469 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 SWSAP1Q6NVH7 229 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 PDXDC2PQ6P474 469 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 MIER3Q7Z3K6 550 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 SERINC5Q86VE9 423 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 DHX38Q92620 1227 aaKnown RBP20.73■□□□□ 0.91
COPS7A-216ENST00000543170 ATP6V0A1Q93050 837 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 MTMR9Q96QG7 549 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 PPP1R12CQ9BZL4 782 aa20.73■□□□□ 0.91
COPS7A-216ENST00000543170 POTEB3A0JP26 581 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 RRN3P2A6NIE6 340 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 CHMP2AO43633 222 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 MARCH6O60337 910 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 FPGSQ05932 587 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 SPIRE1Q08AE8 756 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 GRIK4Q16099 956 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 MCTP1Q6DN14 999 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 POTEBQ6S5H4 581 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 TMEM199Q8N511 208 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 ATP8B4Q8TF62 1192 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 FAM167AQ96KS9 214 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 WNT8AQ9H1J5 351 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 SETD4Q9NVD3 440 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 GABBR1Q9UBS5 961 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 TRPC6Q9Y210 931 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 COL1A2P08123 1366 aa20.72■□□□□ 0.91
COPS7A-216ENST00000543170 MBLAC1A4D2B0 266 aaPredicted RBP20.71■□□□□ 0.91
COPS7A-216ENST00000543170 HBP1O60381 514 aa20.71■□□□□ 0.91
COPS7A-216ENST00000543170 CAND2O75155 1236 aa20.71■□□□□ 0.91
COPS7A-216ENST00000543170 CYP2C18P33260 490 aa20.71■□□□□ 0.91
COPS7A-216ENST00000543170 MCM7P33993 719 aa20.71■□□□□ 0.91
COPS7A-216ENST00000543170 ZNF200P98182 395 aaPredicted RBP20.71■□□□□ 0.91
COPS7A-216ENST00000543170 PPIGQ13427 754 aaKnown RBP eCLIP20.71■□□□□ 0.91
COPS7A-216ENST00000543170 TRIM71Q2Q1W2 868 aaKnown RBP20.71■□□□□ 0.91
COPS7A-216ENST00000543170 RILPL1Q5EBL4 403 aa20.71■□□□□ 0.91
COPS7A-216ENST00000543170 BBXQ8WY36 941 aaPredicted RBP20.71■□□□□ 0.91
COPS7A-216ENST00000543170 UMODL1Q5DID0 1318 aa20.71■□□□□ 0.91
COPS7A-216ENST00000543170 RANBP2P49792 3224 aaKnown RBP20.7■□□□□ 0.9
COPS7A-216ENST00000543170 TREHO43280 583 aa20.7■□□□□ 0.9
COPS7A-216ENST00000543170 RPLP2P05387 115 aaKnown RBP20.7■□□□□ 0.9
COPS7A-216ENST00000543170 INSRRP14616 1297 aa20.7■□□□□ 0.9
COPS7A-216ENST00000543170 ATP4AP20648 1035 aa20.7■□□□□ 0.9
COPS7A-216ENST00000543170 TAF2Q6P1X5 1199 aa20.7■□□□□ 0.9
COPS7A-216ENST00000543170 BRAPQ7Z569 592 aa20.7■□□□□ 0.9
COPS7A-216ENST00000543170 RPAINQ86UA6 219 aa20.7■□□□□ 0.9
COPS7A-216ENST00000543170 UBE2OQ9C0C9 1292 aaKnown RBP20.7■□□□□ 0.9
COPS7A-216ENST00000543170 TUBE1Q9UJT0 475 aa20.7■□□□□ 0.9
COPS7A-216ENST00000543170 COLQQ9Y215 455 aaPredicted RBP20.7■□□□□ 0.9
COPS7A-216ENST00000543170 PARNO95453 639 aaKnown RBP20.69■□□□□ 0.9
COPS7A-216ENST00000543170 ATP2B1P20020 1258 aa20.69■□□□□ 0.9
COPS7A-216ENST00000543170 RFC2P35250 354 aa20.69■□□□□ 0.9
COPS7A-216ENST00000543170 TOB1P50616 345 aaPredicted RBP20.69■□□□□ 0.9
COPS7A-216ENST00000543170 RETREG2Q8NC44 543 aa20.69■□□□□ 0.9
COPS7A-216ENST00000543170 TMEM60Q9H2L4 133 aa20.69■□□□□ 0.9
COPS7A-216ENST00000543170 PCDH10Q9P2E7 1040 aa20.69■□□□□ 0.9
COPS7A-216ENST00000543170 PCDHA12Q9UN75 941 aa20.69■□□□□ 0.9
COPS7A-216ENST00000543170 CEP131Q9UPN4 1083 aa20.69■□□□□ 0.9
COPS7A-216ENST00000543170 EML1O00423 815 aa20.68■□□□□ 0.9
COPS7A-216ENST00000543170 ZNF862O60290 1169 aa20.68■□□□□ 0.9
COPS7A-216ENST00000543170 DKC1O60832 514 aaKnown RBP eCLIP20.68■□□□□ 0.9
COPS7A-216ENST00000543170 OATP04181 439 aa20.68■□□□□ 0.9
COPS7A-216ENST00000543170 PFKMP08237 780 aa20.68■□□□□ 0.9
COPS7A-216ENST00000543170 OR52Z1P0C646 297 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms