RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 COBLO75128 1261 aa9.67□□□□□ -0.86
THBS3-210ENST00000541576 KRT76Q01546 638 aa9.67□□□□□ -0.86
THBS3-210ENST00000541576 PDE4DQ08499 809 aa9.67□□□□□ -0.86
THBS3-210ENST00000541576 CNNM4Q6P4Q7 775 aa9.67□□□□□ -0.86
THBS3-210ENST00000541576 UNC13DQ70J99 1090 aa9.67□□□□□ -0.86
THBS3-210ENST00000541576 GPBP1Q86WP2 473 aa9.67□□□□□ -0.86
THBS3-210ENST00000541576 SMC1BQ8NDV3 1235 aa9.67□□□□□ -0.86
THBS3-210ENST00000541576 ENOX1Q8TC92 643 aaKnown RBP9.67□□□□□ -0.86
THBS3-210ENST00000541576 MPHOSPH6Q99547 160 aaKnown RBP9.67□□□□□ -0.86
THBS3-210ENST00000541576 KIF3CO14782 793 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 EDNRBP24530 442 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 SLC12A3P55017 1021 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 STX17P56962 302 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 FSTL1Q12841 308 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 HPS3Q969F9 1004 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 LXNQ9BS40 222 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 ST7Q9NRC1 585 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 DNAJC25-GNG10A0A024R161 153 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 SPATA31C2B4DYI2 1134 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 EYA4O95677 639 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 IDEP14735 1019 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 KCNA2P16389 499 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 PRCPP42785 496 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 JAK3P52333 1124 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 SYT2Q8N9I0 419 aaPredicted RBP9.66□□□□□ -0.86
THBS3-210ENST00000541576 GIMAP8Q8ND71 665 aaPredicted RBP9.66□□□□□ -0.86
THBS3-210ENST00000541576 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 NACC1Q96RE7 527 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 BHMT2Q9H2M3 363 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 NFE2L3Q9Y4A8 694 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 TLL2Q9Y6L7 1015 aa9.66□□□□□ -0.86
THBS3-210ENST00000541576 WDR64B1ANS9 1081 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 KRT18P05783 430 aaKnown RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 P4HBP07237 508 aaKnown RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 SLC10A3P09131 477 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 CYP11B2P19099 503 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 SFNP31947 248 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 STK4Q13043 487 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 FAM110CQ1W6H9 321 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 HSP90AA4PQ58FG1 418 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 SEPT14Q6ZU15 432 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 PIGOQ8TEQ8 1089 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 DNAJC19Q96DA6 116 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 TMEM51Q9NW97 253 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 NFASCO94856 1347 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 SYNRGQ9UMZ2 1314 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 IGF2BP3O00425 579 aaKnown RBP eCLIP9.65□□□□□ -0.86
THBS3-210ENST00000541576 KIF20AO95235 890 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 CCNE2O96020 404 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 ICAM3P32942 547 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 STIM1Q13586 685 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 ZNF746Q6NUN9 644 aaPredicted RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 ZSWIM4Q9H7M6 989 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 JPH1Q9HDC5 661 aaPredicted RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 SAMSN1Q9NSI8 373 aaKnown RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 WRAP73Q9P2S5 460 aaPredicted RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 NRBP1Q9UHY1 535 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 ABT1Q9ULW3 272 aaKnown RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
THBS3-210ENST00000541576 ZNFX1Q9P2E3 1918 aaKnown RBP9.65□□□□□ -0.86
THBS3-210ENST00000541576 NPHP3-ACAD11A0A0J9YXS1 232 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 ZBTB39O15060 712 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 PAK1Q13153 545 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 ARSHQ5FYA8 562 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 ADSSL1Q8N142 457 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 RDM1Q8NG50 284 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 FGD4Q96M96 766 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 ZCCHC17Q9NP64 241 aaKnown RBP9.65□□□□□ -0.87
THBS3-210ENST00000541576 TRMT1Q9NXH9 659 aaKnown RBP9.65□□□□□ -0.87
THBS3-210ENST00000541576 IVNS1ABPQ9Y6Y0 642 aa9.65□□□□□ -0.87
THBS3-210ENST00000541576 STRNO43815 780 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 ZNF18P17022 549 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 QARSP47897 775 aaKnown RBP9.64□□□□□ -0.87
THBS3-210ENST00000541576 TPD52L1Q16890 204 aaPredicted RBP9.64□□□□□ -0.87
THBS3-210ENST00000541576 CCDC186Q7Z3E2 898 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 CCDC65Q8IXS2 484 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 SENP7Q9BQF6 1050 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 BCAS3Q9H6U6 928 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 PANK4Q9NVE7 773 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 IFNKQ9P0W0 207 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 SLC9A2Q9UBY0 812 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 PSMA7O14818 248 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 PMS1P54277 932 aaKnown RBP9.64□□□□□ -0.87
THBS3-210ENST00000541576 INHBEP58166 350 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 FANCCQ00597 558 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 RAD51AP2Q09MP3 1159 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 TAF1CQ15572 869 aaPredicted RBP9.64□□□□□ -0.87
THBS3-210ENST00000541576 SPATA1Q5VX52 437 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 NELFBQ8WX92 580 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 KCNF1Q9H3M0 494 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 RWDD2AQ9UIY3 292 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 PCDHA10Q9Y5I2 948 aa9.64□□□□□ -0.87
THBS3-210ENST00000541576 LOC102724159A0A0B4J2E5 919 aa9.63□□□□□ -0.87
THBS3-210ENST00000541576 TMEM88BA6NKF7 163 aa9.63□□□□□ -0.87
THBS3-210ENST00000541576 TNNT1P13805 278 aa9.63□□□□□ -0.87
THBS3-210ENST00000541576 ADORA2AP29274 412 aa9.63□□□□□ -0.87
THBS3-210ENST00000541576 PPP1R2P41236 205 aa9.63□□□□□ -0.87
THBS3-210ENST00000541576 SP2Q02086 613 aa9.63□□□□□ -0.87
THBS3-210ENST00000541576 CACNB1Q02641 598 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms