RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 NSUN6Q8TEA1 469 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 MRPS27Q92552 414 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 SYAP1Q96A49 352 aaPredicted RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 UIMC1Q96RL1 719 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 MPHOSPH6Q99547 160 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 ANP32EQ9BTT0 268 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 EFCC1Q9HA90 598 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 PXMP2Q9NR77 195 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 CYP39A1Q9NYL5 469 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 COL20A1Q9P218 1284 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 MORF4L1Q9UBU8 362 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 ADD3Q9UEY8 706 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 FBXO2Q9UK22 296 aaPredicted RBP7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 ADGRA2Q96PE1 1338 aa7.5□□□□□ -1.21
CLTCL1-206ENST00000540896 RLFQ13129 1914 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 CYP3A7-CYP3A51PA0A087WV96 503 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 A0A1B0GVL5 298 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 A0A1W2PQ27 194 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 A0A1W2PQ64 194 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 A0A1W2PQD8 194 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 SLC37A4O43826 429 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 KINO60870 393 aaKnown RBP7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 FKTNO75072 461 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PGK2P07205 417 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 VSIG8P0DPA2 414 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 CYP3A7P24462 503 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 CCND2P30279 289 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 MAPK4P31152 587 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 LONP1P36776 959 aaKnown RBP7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 TXLNAP40222 546 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 UBA7P41226 1012 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 TECP42680 631 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 LBX1P52954 281 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 GHRHRQ02643 423 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PGM5Q15124 567 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 CEP55Q53EZ4 464 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 SPECC1Q5M775 1068 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 AXDND1Q5T1B0 1012 aaPredicted RBP7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 C6orf118Q5T5N4 469 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PCNX4Q63HM2 1172 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 CAVIN1Q6NZI2 390 aaKnown RBP7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 XRRA1Q6P2D8 792 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PDXDC2PQ6P474 469 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PLA2G4DQ86XP0 818 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 SLFN12Q8IYM2 578 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 CCDC116Q8IYX3 515 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 C4orf32Q8N8J7 132 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 ZNF296Q8WUU4 475 aaPredicted RBP7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PANK2Q9BZ23 570 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 RAB34Q9BZG1 259 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 GZF1Q9H116 711 aaPredicted RBP7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 CSRNP2Q9H175 543 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PORCNQ9H237 461 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 TMEM60Q9H2L4 133 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PCDHA12Q9UN75 941 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 PARP14Q460N5 1801 aa7.49□□□□□ -1.21
CLTCL1-206ENST00000540896 FAM86B1E9PN63 330 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 STRNO43815 780 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 FAM86B2P0C5J1 330 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 HSPA8P11142 646 aaKnown RBP7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 LIG1P18858 919 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 FSHRP23945 695 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 CIITAP33076 1130 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 PRPHP41219 470 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 SYKP43405 635 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 LACTBP83111 547 aaPredicted RBP7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 SETQ01105 290 aaPredicted RBP7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 CNTN2Q02246 1040 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 GRIN1Q05586 938 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 FAM160A1Q05DH4 1040 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 KIF22Q14807 665 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 SKIV2LQ15477 1246 aaKnown RBP7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 ZRSR1Q15695 479 aaKnown RBP7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 STXBP2Q15833 593 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 FAM110CQ1W6H9 321 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 Q4G0T1 1027 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 RESP18Q5W5W9 173 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 SHC4Q6S5L8 630 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 PLEKHH3Q7Z736 793 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 DPP9Q86TI2 863 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 DNERQ8NFT8 737 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 CYP2W1Q8TAV3 490 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 CRYGNQ8WXF5 182 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 ERO1AQ96HE7 468 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 AK8Q96MA6 479 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 FAM20AQ96MK3 541 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 MTMR9Q96QG7 549 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 IWS1Q96ST2 819 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 MXRA8Q9BRK3 442 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 SDF4Q9BRK5 362 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 PDCD2LQ9BRP1 358 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 TTC12Q9H892 705 aaPredicted RBP7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 DACT1Q9NYF0 836 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 LRWD1Q9UFC0 647 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 KCNH3Q9ULD8 1083 aa7.48□□□□□ -1.21
CLTCL1-206ENST00000540896 MORC2Q9Y6X9 1032 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms