RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPT1A-206ENST00000540367 PGRMC1O00264 195 aaKnown RBP12.28□□□□□ -0.44
CPT1A-206ENST00000540367 SLC37A4O43826 429 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 CEP104O60308 925 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 IFI16Q16666 785 aaKnown RBP12.28□□□□□ -0.44
CPT1A-206ENST00000540367 FAM26FQ5R3K3 315 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 KRT79Q5XKE5 535 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 DDX42Q86XP3 938 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPT1A-206ENST00000540367 GIMAP7Q8NHV1 300 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 DNAJC19Q96DA6 116 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 SEC16BQ96JE7 1060 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 NUDT12Q9BQG2 462 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 TMEM260Q9NX78 707 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 FBXL5Q9UKA1 691 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 CCDC188H7C350 402 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 DNM1LO00429 736 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 SART1O43290 800 aaKnown RBP12.28□□□□□ -0.44
CPT1A-206ENST00000540367 ZBTB48P10074 688 aaPredicted RBP12.28□□□□□ -0.44
CPT1A-206ENST00000540367 RASA1P20936 1047 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 TMOD1P28289 359 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 SNCBQ16143 134 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 SPRED3Q2MJR0 410 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 CYB5D1Q6P9G0 228 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 CCDC50Q8IVM0 306 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 PARP9Q8IXQ6 854 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 FUKQ8N0W3 1084 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 LRRC57Q8N9N7 239 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 LEMD3Q9Y2U8 911 aa12.28□□□□□ -0.44
CPT1A-206ENST00000540367 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
CPT1A-206ENST00000540367 TDP2O95551 362 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 BYSLQ13895 437 aaKnown RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 LACTB2Q53H82 288 aaPredicted RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 SPTY2D1Q68D10 685 aaPredicted RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 UBLCP1Q8WVY7 318 aaPredicted RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 RAPGEF5Q92565 580 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 P3H4Q92791 437 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 TATDN2Q93075 761 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 SGSM3Q96HU1 749 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■■□□ 18.1
CPT1A-206ENST00000540367 CNOT8Q9UFF9 292 aaKnown RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 NOC2LQ9Y3T9 749 aaKnown RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 TMCO5BA8MYB1 307 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 ENOX2Q16206 610 aaKnown RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 ODF2Q5BJF6 829 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 TMC3Q7Z5M5 1100 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 MAGEC3Q8TD91 643 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 SH3RF3Q8TEJ3 882 aaPredicted RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 PIGSQ96S52 555 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 AP1M1Q9BXS5 423 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 DDX47Q9H0S4 455 aaKnown RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 PANK4Q9NVE7 773 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 NOVA2Q9UNW9 492 aaKnown RBP12.27□□□□□ -0.45
CPT1A-206ENST00000540367 SNED1Q8TER0 1413 aa12.27□□□□□ -0.45
CPT1A-206ENST00000540367 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 GNPATO15228 680 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 ELF1P32519 619 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 FLT3P36888 993 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 PTK2Q05397 1052 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 BARGINQ6ZT62 677 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 ZC3H3Q8IXZ2 948 aaKnown RBP12.26□□□□□ -0.45
CPT1A-206ENST00000540367 METTL13Q8N6R0 699 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 ZNF713Q8N859 430 aaPredicted RBP12.26□□□□□ -0.45
CPT1A-206ENST00000540367 FGFBP2Q9BYJ0 223 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 SLITRK6Q9H5Y7 841 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 MYH7BA7E2Y1 1941 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 ATP8B3O60423 1300 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 EDIL3O43854 480 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 EPS15P42566 896 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 SCTRP47872 440 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 XRCC4Q13426 336 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
CPT1A-206ENST00000540367 ZNF571Q7Z3V5 609 aaPredicted RBP12.26□□□□□ -0.45
CPT1A-206ENST00000540367 IRF2BP2Q7Z5L9 587 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 RASGEF1CQ8N431 466 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 SEC14L1Q92503 715 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 KANSL2Q9H9L4 492 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 VAT1LQ9HCJ6 419 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 HAUS2Q9NVX0 235 aa12.26□□□□□ -0.45
CPT1A-206ENST00000540367 KRIT1O00522 736 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 DAPK3O43293 454 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 NF2P35240 595 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 MAGOHP61326 146 aaKnown RBP12.25□□□□□ -0.45
CPT1A-206ENST00000540367 ECM1Q16610 540 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 KCTD19Q17RG1 926 aaPredicted RBP12.25□□□□□ -0.45
CPT1A-206ENST00000540367 FAM228AQ86W67 206 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 TPCN2Q8NHX9 752 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 MAGOHBQ96A72 148 aaKnown RBP12.25□□□□□ -0.45
CPT1A-206ENST00000540367 PSMD1Q99460 953 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 CDCA7Q9BWT1 371 aaPredicted RBP12.25□□□□□ -0.45
CPT1A-206ENST00000540367 CNOT10Q9H9A5 744 aaKnown RBP12.25□□□□□ -0.45
CPT1A-206ENST00000540367 NAGPAQ9UK23 515 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 USP21Q9UK80 565 aa12.25□□□□□ -0.45
CPT1A-206ENST00000540367 BZW2Q9Y6E2 419 aaKnown RBP12.25□□□□□ -0.45
CPT1A-206ENST00000540367 DDX60LQ5H9U9 1706 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms