RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MYBP10242 640 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 HSPA8P11142 646 aaKnown RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 PFKFB1P16118 471 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 KRT4P19013 534 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 IBSPP21815 317 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 HALP42357 657 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SARSP49591 514 aaKnown RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 TUBP50607 506 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 RAD23BP54727 409 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 XIAPP98170 497 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 KIF23Q02241 960 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 FOXD4Q12950 439 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 TUBA3CQ13748 450 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 PDIA6Q15084 440 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 STK38Q15208 465 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SEPT7Q16181 437 aaKnown RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 DDB1Q16531 1140 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 ZCWPW2Q504Y3 356 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SPATA1Q5VX52 437 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 CCDC102BQ68D86 513 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 TMEM92Q6UXU6 159 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 Q6ZNX1 250 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 ARHGAP27Q6ZUM4 889 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 BPHLQ86WA6 291 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 CREG2Q8IUH2 290 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 MAP7D3Q8IWC1 876 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 BBS5Q8N3I7 341 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SH2D3CQ8N5H7 860 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 PPFIBP2Q8ND30 876 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SPATA20Q8TB22 786 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 PLEKHO2Q8TD55 490 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SSH3Q8TE77 659 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 NOC3LQ8WTT2 800 aaKnown RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 NAT14Q8WUY8 206 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 UPF1Q92900 1129 aaKnown RBP eCLIP6.66□□□□□ -1.341e-26■□□□□ 8.6
SNHG1-211ENST00000539921 EVI5LQ96CN4 794 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 SGF29Q96ES7 293 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 GPATCH3Q96I76 525 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 NEUROD6Q96NK8 337 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 TMEM109Q9BVC6 243 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 ECT2Q9H8V3 914 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 HSFX1Q9UBD0 423 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 ZNF212Q9UDV6 495 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 COLQQ9Y215 455 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 NFE2L3Q9Y4A8 694 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 USP15Q9Y4E8 981 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 GPC6Q9Y625 555 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 NFS1Q9Y697 457 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 PASKQ96RG2 1323 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 MED23Q9ULK4 1368 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 PRG4Q92954 1404 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-211ENST00000539921 CD163L1Q9NR16 1453 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 ARHGAP23Q9P227 1491 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 CACNA1FO60840 1977 aa6.66□□□□□ -1.34
SNHG1-211ENST00000539921 ABCA8O94911 1581 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 CLTCQ00610 1675 aaKnown RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 KIF20BQ96Q89 1820 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 PIK3CDO00329 1044 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ZNF862O60290 1169 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 GNA14O95837 355 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 GYPCP04921 128 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ATP1A1P05023 1023 aaKnown RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 KRT16P08779 473 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 CYP2C9P11712 490 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 VAV1P15498 845 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 RXRAP19793 462 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 SYKP43405 635 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 MMP13P45452 471 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 PDE4DQ08499 809 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 RBL2Q08999 1139 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 PTK7Q13308 1070 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 RASGRF1Q13972 1273 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 MORC3Q14149 939 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 MTF1Q14872 753 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 SLC39A14Q15043 492 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ANO1Q5XXA6 986 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 TRIM68Q6AZZ1 485 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 KIAA1841Q6NSI8 718 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 DHRS4L2Q6PKH6 230 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 BTNL9Q6UXG8 535 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 B3GNT6Q6ZMB0 384 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 SAPCD2Q86UD0 394 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 SPATA24Q86W54 205 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 SCUBE1Q8IWY4 988 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ZBED8Q8IZ13 594 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ARL10Q8N8L6 244 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 NECAB1Q8N987 351 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 AIDAQ96BJ3 306 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 DGCR14Q96DF8 476 aaKnown RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 CCDC42Q96M95 316 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 MEIS3Q99687 375 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 SIKE1Q9BRV8 207 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ASCC2Q9H1I8 757 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-211ENST00000539921 ISCUQ9H1K1 167 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 IL25Q9H293 177 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 CCDC68Q9H2F9 335 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 PARVGQ9HBI0 331 aa6.65□□□□□ -1.34
SNHG1-211ENST00000539921 PALMDQ9NP74 551 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms