RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 USP34Q70CQ2 3546 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 ENPP3O14638 875 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 PRC1O43663 620 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 TGFB3P10600 412 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 CD52P31358 61 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 ICAM3P32942 547 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 HSPA4P34932 840 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 TCF7P36402 384 aaPredicted RBP17.16■□□□□ 0.34
USB1-203ENST00000539737 IER5LQ5T953 404 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 RTN4RL1Q86UN2 441 aaPredicted RBP17.16■□□□□ 0.34
USB1-203ENST00000539737 RNF135Q8IUD6 432 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 TRAPPC12Q8WVT3 735 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 FAM49AQ9H0Q0 323 aaPredicted RBP17.16■□□□□ 0.34
USB1-203ENST00000539737 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 HCSTQ9UBK5 93 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 ZDBF2Q9HCK1 2354 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 TTC3P53804 2025 aa17.16■□□□□ 0.34
USB1-203ENST00000539737 PNMA6FA0A0J9YX94 578 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 FIBPO43427 364 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 HMGB1P09429 215 aaKnown RBP17.15■□□□□ 0.34
USB1-203ENST00000539737 RXRAP19793 462 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 ANTXR2P58335 489 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 BTG3Q14201 252 aaPredicted RBP17.15■□□□□ 0.34
USB1-203ENST00000539737 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
USB1-203ENST00000539737 UBE2SQ16763 222 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 PUS10Q3MIT2 529 aaKnown RBP17.15■□□□□ 0.34
USB1-203ENST00000539737 GNPTABQ3T906 1256 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 MARCH8Q5T0T0 291 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 CATIPQ7Z7H3 387 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 RBM23Q86U06 439 aaKnown RBP17.15■□□□□ 0.34
USB1-203ENST00000539737 PRSS33Q8NF86 280 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 KCNB2Q92953 911 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 CDY2AQ9Y6F7 541 aa17.15■□□□□ 0.34
USB1-203ENST00000539737 PLXNA4Q9HCM2 1894 aa17.14■□□□□ 0.33
USB1-203ENST00000539737 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
USB1-203ENST00000539737 TROAPQ12815 778 aa17.14■□□□□ 0.33
USB1-203ENST00000539737 NEDD9Q14511 834 aa17.14■□□□□ 0.33
USB1-203ENST00000539737 GRIK4Q16099 956 aa17.14■□□□□ 0.33
USB1-203ENST00000539737 FBXO47Q5MNV8 452 aa17.14■□□□□ 0.33
USB1-203ENST00000539737 NEK1Q96PY6 1258 aa17.14■□□□□ 0.33
USB1-203ENST00000539737 BARX2Q9UMQ3 279 aaPredicted RBP17.14■□□□□ 0.33
USB1-203ENST00000539737 C5orf67F2Z3F1 127 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 STXBP3O00186 592 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 SH2B2O14492 632 aaPredicted RBP17.13■□□□□ 0.33
USB1-203ENST00000539737 MEIS2O14770 477 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 ITGB1P05556 798 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 KCNA2P16389 499 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 TMTC2Q8N394 836 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 SAMD3Q8N6K7 520 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 APBB2Q92870 758 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 ZNF689Q96CS4 500 aaPredicted RBP17.13■□□□□ 0.33
USB1-203ENST00000539737 PCYT2Q99447 389 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 C11orf84Q9BUA3 381 aaPredicted RBP17.13■□□□□ 0.33
USB1-203ENST00000539737 MAP3K20Q9NYL2 800 aaKnown RBP17.13■□□□□ 0.33
USB1-203ENST00000539737 CLEC1BQ9P126 229 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
USB1-203ENST00000539737 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
USB1-203ENST00000539737 CAND2O75155 1236 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 DGKIO75912 1065 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 GLP2RO95838 553 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 GNAT1P11488 350 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 ITGB5P18084 799 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 NDUFV1P49821 464 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 SMAD4Q13485 552 aaKnown RBP17.12■□□□□ 0.33
USB1-203ENST00000539737 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 KLHL23Q8NBE8 558 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 IGDCC4Q8TDY8 1250 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 FAM86C1Q9NVL1 165 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 CD207Q9UJ71 328 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 TUBE1Q9UJT0 475 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
USB1-203ENST00000539737 PER2O15055 1255 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 DDAH1O94760 285 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 MMP1P03956 469 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 PSMA5P28066 241 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 KIF5BP33176 963 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 LIFRP42702 1097 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 NRIP1P48552 1158 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 ADAM15Q13444 863 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
USB1-203ENST00000539737 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
USB1-203ENST00000539737 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 CLP1Q92989 425 aaKnown RBP17.11■□□□□ 0.33
USB1-203ENST00000539737 PGBD1Q96JS3 809 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
USB1-203ENST00000539737 CCDC69A6NI79 296 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 SP100P23497 879 aaPredicted RBP17.1■□□□□ 0.33
USB1-203ENST00000539737 MRPS6P82932 125 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms