RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 DEFB128Q7Z7B8 93 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 ZNF274Q96GC6 653 aaPredicted RBP8.27□□□□□ -1.09
LMO3-220ENST00000539232 MPHOSPH6Q99547 160 aaKnown RBP8.27□□□□□ -1.09
LMO3-220ENST00000539232 MXRA8Q9BRK3 442 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 ZMYND12Q9H0C1 365 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 IRF2BPLQ9H1B7 796 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 MLXIPQ9HAP2 919 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 AGO4Q9HCK5 861 aaKnown RBP8.27□□□□□ -1.09
LMO3-220ENST00000539232 JADE2Q9NQC1 790 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 KCNH7Q9NS40 1196 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 SETD4Q9NVD3 440 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 GTF2IRD1Q9UHL9 959 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 PCDHA11Q9Y5I1 949 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 TRIOO75962 3097 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 SPDYE3A6NKU9 549 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 M0R2N6 131 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 MEIS1O00470 390 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 DHX15O43143 795 aaKnown RBP8.26□□□□□ -1.09
LMO3-220ENST00000539232 RRP9O43818 475 aaKnown RBP8.26□□□□□ -1.09
LMO3-220ENST00000539232 KPNA6O60684 536 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 PPFIA4O75335 1185 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 ARHGEF15O94989 841 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 SMIM10L2AP0DMW4 78 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 SMIM10L2BP0DMW5 78 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 TGFB3P10600 412 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 MYOGP15173 224 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 MARK3P27448 753 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 SREBF1P36956 1147 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 NEK4P51957 841 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 FOSBP53539 338 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 TCF15Q12870 199 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 PTGISQ16647 500 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 CEP55Q53EZ4 464 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 XRRA1Q6P2D8 792 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 RUFY4Q6ZNE9 571 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 OTOP2Q7RTS6 562 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 SPRED2Q7Z698 418 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 SESTD1Q86VW0 696 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 TMEM199Q8N511 208 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 LENG9Q96B70 501 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 GPRASP2Q96D09 838 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 RNF26Q9BY78 433 aaPredicted RBP8.26□□□□□ -1.09
LMO3-220ENST00000539232 MCM3APO60318 1980 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 NCOR2Q9Y618 2525 aa8.26□□□□□ -1.09
LMO3-220ENST00000539232 GVINP1Q7Z2Y8 2422 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 TECTAO75443 2155 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 ZNFX1Q9P2E3 1918 aaKnown RBP8.25□□□□□ -1.09
LMO3-220ENST00000539232 CCDC196A0A1B0GTZ2 297 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 ESYT2A0FGR8 921 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 H3BRB1 525 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 DDX39AO00148 427 aaKnown RBP8.25□□□□□ -1.09
LMO3-220ENST00000539232 RFXAPO00287 272 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 WNT7AO00755 349 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 TLR3O15455 904 aaKnown RBP8.25□□□□□ -1.09
LMO3-220ENST00000539232 TREHO43280 583 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 NBNO60934 754 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 CD2BP2O95400 341 aaKnown RBP8.25□□□□□ -1.09
LMO3-220ENST00000539232 IQCF3P0C7M6 154 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 HOXC8P31273 242 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 TCF7P36402 384 aaPredicted RBP8.25□□□□□ -1.09
LMO3-220ENST00000539232 RABGGTBP53611 331 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 ANAPC15P60006 121 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 ADAM17P78536 824 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 SSRP1Q08945 709 aaKnown RBP8.25□□□□□ -1.09
LMO3-220ENST00000539232 MTMR1Q13613 665 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 GNPTABQ3T906 1256 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 LEXMQ3ZCV2 418 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 MARCH8Q5T0T0 291 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 ZNF618Q5T7W0 954 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 IER5LQ5T953 404 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 KRT40Q6A162 431 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 TRAPPC12Q8WVT3 735 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 SENP7Q9BQF6 1050 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 TUT1Q9H6E5 874 aaKnown RBP8.25□□□□□ -1.09
LMO3-220ENST00000539232 IL23AQ9NPF7 189 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 MROH7Q68CQ1 1323 aa8.25□□□□□ -1.09
LMO3-220ENST00000539232 PLXNA3P51805 1871 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 PROB1E7EW31 1015 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 NOP56O00567 594 aaKnown RBP8.24□□□□□ -1.09
LMO3-220ENST00000539232 STAM2O75886 525 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 TDP2O95551 362 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 FOSP01100 380 aaPredicted RBP8.24□□□□□ -1.09
LMO3-220ENST00000539232 FGBP02675 491 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 CYP3A4P08684 503 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 CTSHP09668 335 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 CKBP12277 381 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 ATP4AP20648 1035 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 NLRP5P59047 1200 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 ACTR2P61160 394 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 NEDD9Q14511 834 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 PRR16Q569H4 304 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 BRDTQ58F21 947 aaPredicted RBP8.24□□□□□ -1.09
LMO3-220ENST00000539232 KCNV1Q6PIU1 500 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 BMP8AQ7Z5Y6 402 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 SERINC5Q86VE9 423 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 PLA2G4DQ86XP0 818 aa8.24□□□□□ -1.09
LMO3-220ENST00000539232 REXO1Q8N1G1 1221 aaKnown RBP8.24□□□□□ -1.09
LMO3-220ENST00000539232 C7orf31Q8N865 590 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms