RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PPP4R3CPQ6ZMV5 832 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 COG1Q8WTW3 980 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 ARHGEF10LQ9HCE6 1279 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 BUB1O43683 1085 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 RAD17O75943 681 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 TUBBP07437 444 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 RAPGEF1Q13905 1077 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 ZYXQ15942 572 aaKnown RBP27.43■■□□□ 1.98
RAB40C-204ENST00000538492 ZC3H3Q8IXZ2 948 aaKnown RBP27.43■■□□□ 1.98
RAB40C-204ENST00000538492 ZFP91Q96JP5 570 aaPredicted RBP27.43■■□□□ 1.98
RAB40C-204ENST00000538492 RPGRIP1Q96KN7 1286 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 HERC5Q9UII4 1024 aaKnown RBP27.43■■□□□ 1.98
RAB40C-204ENST00000538492 CHMP2AO43633 222 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 CXCR5P32302 372 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 PIGOQ8TEQ8 1089 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 ALS2CR12Q96Q35 445 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 FAM184BQ9ULE4 1060 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 IGLV3-22A0A075B6J6 115 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 SPDYE2BA6NHP3 402 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 SERPING1P05155 500 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 SPDYE6P0CI01 402 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 CTTNQ14247 550 aaKnown RBP27.42■■□□□ 1.98
RAB40C-204ENST00000538492 NFRKBQ6P4R8 1299 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 CREG2Q8IUH2 290 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 HDAC9Q9UKV0 1011 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 RABGAP1Q9Y3P9 1069 aa27.42■■□□□ 1.98
RAB40C-204ENST00000538492 SFI1A8K8P3 1242 aa27.41■■□□□ 1.98
RAB40C-204ENST00000538492 PIK3CDO00329 1044 aa27.41■■□□□ 1.98
RAB40C-204ENST00000538492 WDR18Q9BV38 432 aa27.41■■□□□ 1.98
RAB40C-204ENST00000538492 NCK2O43639 380 aa27.41■■□□□ 1.98
RAB40C-204ENST00000538492 CYP3A4P08684 503 aa27.41■■□□□ 1.98
RAB40C-204ENST00000538492 NAP1L1P55209 391 aaKnown RBP27.41■■□□□ 1.98
RAB40C-204ENST00000538492 EPM2AIP1Q7L775 607 aaPredicted RBP27.41■■□□□ 1.98
RAB40C-204ENST00000538492 FAM133AQ8N9E0 248 aa27.41■■□□□ 1.98
RAB40C-204ENST00000538492 NUCKS1Q9H1E3 243 aaKnown RBP27.41■■□□□ 1.98
RAB40C-204ENST00000538492 PJA2O43164 708 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 N4BP1O75113 896 aaKnown RBP27.4■■□□□ 1.98
RAB40C-204ENST00000538492 ACTN1P12814 892 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 CDAN1Q8IWY9 1227 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 HINFPQ9BQA5 517 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 TRAF3IP3Q9Y228 551 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 KCNA1Q09470 495 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 ARHGAP27Q6ZUM4 889 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 SUPT20HQ8NEM7 779 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 SYN2Q92777 582 aaPredicted RBP27.4■■□□□ 1.98
RAB40C-204ENST00000538492 ARMCX3Q9UH62 379 aaPredicted RBP27.4■■□□□ 1.98
RAB40C-204ENST00000538492 TMX2Q9Y320 296 aa27.4■■□□□ 1.98
RAB40C-204ENST00000538492 LRRIQ3A6PVS8 624 aaPredicted RBP27.39■■□□□ 1.98
RAB40C-204ENST00000538492 TBCAO75347 108 aaKnown RBP27.39■■□□□ 1.98
RAB40C-204ENST00000538492 GCNT3O95395 438 aa27.39■■□□□ 1.98
RAB40C-204ENST00000538492 TPH2Q8IWU9 490 aa27.39■■□□□ 1.98
RAB40C-204ENST00000538492 OSBPL9Q96SU4 736 aa27.39■■□□□ 1.98
RAB40C-204ENST00000538492 POLR3CQ9BUI4 534 aaPredicted RBP27.39■■□□□ 1.98
RAB40C-204ENST00000538492 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.39■■□□□ 1.98
RAB40C-204ENST00000538492 ZBTB12Q9Y330 459 aaPredicted RBP27.39■■□□□ 1.98
RAB40C-204ENST00000538492 POLD1P28340 1107 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 CYP2C19P33261 490 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 FAM193AP78312 1265 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 GANQ9H2C0 597 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 VEZTQ9HBM0 779 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 GOPCQ9HD26 462 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 SMARCAL1Q9NZC9 954 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 ZNF70Q9UC06 446 aaPredicted RBP27.39■■□□□ 1.97
RAB40C-204ENST00000538492 ZBTB21Q9ULJ3 1066 aa27.39■■□□□ 1.97
RAB40C-204ENST00000538492 ZBTB39O15060 712 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 EYA4O95677 639 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 SLC9A1P19634 815 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 GPS2Q13227 327 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 DCAF17Q5H9S7 520 aaPredicted RBP27.38■■□□□ 1.97
RAB40C-204ENST00000538492 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.38■■□□□ 1.97
RAB40C-204ENST00000538492 STK24Q9Y6E0 443 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 COL2A1P02458 1487 aaPredicted RBP27.38■■□□□ 1.97
RAB40C-204ENST00000538492 RBAK-RBAKDNI3L0D1 243 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 EIF3JO75822 258 aaKnown RBP27.38■■□□□ 1.97
RAB40C-204ENST00000538492 DLGAP5Q15398 846 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 LRCH2Q5VUJ6 765 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 RSBN1LQ6PCB5 846 aaPredicted RBP27.38■■□□□ 1.97
RAB40C-204ENST00000538492 MIGA2Q7L4E1 593 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 OTOP1Q7RTM1 612 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 GDAP1L1Q96MZ0 367 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 NOX5Q96PH1 765 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 EHD2Q9NZN4 543 aa27.38■■□□□ 1.97
RAB40C-204ENST00000538492 ATAD5Q96QE3 1844 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 CLIC2O15247 247 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 AKAP3O75969 853 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 RINT1Q6NUQ1 792 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 GSPT2Q8IYD1 628 aaKnown RBP27.37■■□□□ 1.97
RAB40C-204ENST00000538492 PKNOX2Q96KN3 472 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 ADAMTS1Q9UHI8 967 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 PDXKO00764 312 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 CALUO43852 315 aaPredicted RBP27.37■■□□□ 1.97
RAB40C-204ENST00000538492 KLHL30Q0D2K2 578 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 FRMD5Q7Z6J6 570 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 DYDC2Q96IM9 177 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 IKZF4Q9H2S9 585 aa27.37■■□□□ 1.97
RAB40C-204ENST00000538492 ASTN1O14525 1302 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 A0A087X0T9 212 aa27.36■■□□□ 1.97
RAB40C-204ENST00000538492 TARSL2A2RTX5 802 aaKnown RBP27.36■■□□□ 1.97
RAB40C-204ENST00000538492 GCOM1H8Y6P7 765 aaPredicted RBP27.36■■□□□ 1.97
RAB40C-204ENST00000538492 FAM228BP0C875 321 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms