RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CACNB2Q08289 660 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 DHX8Q14562 1220 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 MCM6Q14566 821 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 DUSP28Q4G0W2 176 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 MFSD14CQ5VZR4 134 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 IQSEC1Q6DN90 963 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 SWSAP1Q6NVH7 229 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 TRMT1LQ7Z2T5 733 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 CKAP2LQ8IYA6 745 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 GIMAP8Q8ND71 665 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 RAET1EQ8TD07 263 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 PIGOQ8TEQ8 1089 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 PAGE5Q96GU1 130 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 PCYT2Q99447 389 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 GPR20Q99678 358 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 TUFT1Q9NNX1 390 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 GABBR1Q9UBS5 961 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 PCDHA10Q9Y5I2 948 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 PTCH2Q9Y6C5 1203 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 CASP8AP2Q9UKL3 1982 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 ZNF862O60290 1169 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 ATG7O95352 703 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 GH1P01241 217 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 CCND3P30281 292 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 SFNP31947 248 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 PNOCQ13519 176 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 TRIM50Q86XT4 487 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 SMAP1Q8IYB5 467 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 AFG1LQ8WV93 481 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 RAD54LQ92698 747 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 TIGD1Q96MW7 591 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 TNMDQ9H2S6 317 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 GNRH1P01148 92 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 P4HBP07237 508 aaKnown RBP17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 PSAPP07602 524 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 TCF7P36402 384 aaPredicted RBP17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 ZSCAN23Q3MJ62 389 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 MIS18BP1Q6P0N0 1132 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 CEP57L1Q8IYX8 460 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 OR6J1Q8NGC5 347 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 SH2D3AQ9BRG2 576 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 BLZF1Q9H2G9 400 aa17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 GNEQ9Y223 722 aaKnown RBP17.52■□□□□ 0.39
SFSWAP-206ENST00000537582 BACH1O14867 736 aa17.51■□□□□ 0.39
SFSWAP-206ENST00000537582 DYNC1LI2O43237 492 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-206ENST00000537582 HSPA8P11142 646 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-206ENST00000537582 QARSP47897 775 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-206ENST00000537582 UTP14CQ5TAP6 766 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-206ENST00000537582 RDM1Q8NG50 284 aa17.51■□□□□ 0.39
SFSWAP-206ENST00000537582 IGKV6D-21A0A0A0MT36 114 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 SYCE3A1L190 88 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 NOP56O00567 594 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 ATP4AP20648 1035 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 CNGA1P29973 690 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 LAMC2Q13753 1193 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 NEK9Q8TD19 979 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 SEPT1Q8WYJ6 367 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 LARP4BQ92615 738 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 NT5C3AQ9H0P0 336 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 KBTBD4Q9NVX7 518 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 STK17AQ9UEE5 414 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 FAM184BQ9ULE4 1060 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 IGSF9BQ9UPX0 1349 aa17.5■□□□□ 0.39
SFSWAP-206ENST00000537582 STBD1O95210 358 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 HMGCRP04035 888 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 PLA2G4BP0C869 781 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 PSMC5P62195 406 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 CUL4BQ13620 913 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 POSTNQ15063 836 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 PLA2G4FQ68DD2 849 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 TLK2Q86UE8 772 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 SH3TC2Q8TF17 1288 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 SYAP1Q96A49 352 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 EMID1Q96A84 441 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 BHMT2Q9H2M3 363 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 ZSWIM4Q9H7M6 989 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 ZNF302Q9NR11 478 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 NPHP3-ACAD11A0A0J9YXS1 232 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 MYMKA6NI61 221 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 SLC26A4O43511 780 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 INHAP05111 366 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 ZNF286BP0CG31 522 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 AKR1A1P14550 325 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 MARK3P27448 753 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 SLC12A3P55017 1021 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 PRKCEQ02156 737 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 ARHGEF6Q15052 776 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 MAP3K21Q5TCX8 1036 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 PPTC7Q8NI37 304 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 PXYLP1Q8TE99 480 aa17.49■□□□□ 0.39
SFSWAP-206ENST00000537582 PYM1Q9BRP8 204 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms