RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PCDHGC5Q9Y5F6 944 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 QSER1Q2KHR3 1735 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 MYH4Q9Y623 1939 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 MEI1Q5TIA1 1274 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 SFR1Q86XK3 245 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 DNM3Q9UQ16 869 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 TRAF3IP3Q9Y228 551 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 PCDHAC2Q9Y5I4 1007 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 GREB1LQ9C091 1923 aaPredicted RBP15.73■□□□□ 0.11
USP44-203ENST00000537435 DDTLA6NHG4 134 aaPredicted RBP15.73■□□□□ 0.11
USP44-203ENST00000537435 SPATA31C1P0DKV0 1188 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 SLC9A1P19634 815 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 KNOP1Q1ED39 458 aaKnown RBP15.73■□□□□ 0.11
USP44-203ENST00000537435 SYT2Q8N9I0 419 aaPredicted RBP15.73■□□□□ 0.11
USP44-203ENST00000537435 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 CAVIN3Q969G5 261 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 REEP2Q9BRK0 252 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 TSPYL1Q9H0U9 437 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 PLEKHA4Q9H4M7 779 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 RSPH14Q9UHP6 348 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 ADAMTSL1Q8N6G6 1762 aa15.73■□□□□ 0.11
USP44-203ENST00000537435 GRID2IPA4D2P6 1211 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 TRIM66O15016 1216 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 GLI1P08151 1106 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 RPA1P27694 616 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 FRMD5Q7Z6J6 570 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 SEPT12Q8IYM1 358 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 SH3GL2Q99962 352 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 AMNQ9BXJ7 453 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 ARMCX3Q9UH62 379 aaPredicted RBP15.72■□□□□ 0.11
USP44-203ENST00000537435 GOLGA8KD6RF30 607 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 UBAP1LF5GYI3 381 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 TBX3O15119 743 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 MYBP10242 640 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 PTK2Q05397 1052 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 USH1GQ495M9 461 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 Q4G0T1 1027 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 SIAH1Q8IUQ4 282 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 IFT20Q8IY31 132 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 C10orf67Q8IYJ2 551 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 LENG9Q96B70 501 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 SPAG5Q96R06 1193 aa15.72■□□□□ 0.11
USP44-203ENST00000537435 FAM86B1E9PN63 330 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 OPA1O60313 960 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 SHOX2O60902 331 aaPredicted RBP15.71■□□□□ 0.11
USP44-203ENST00000537435 PPFIA4O75335 1185 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 HEXIM1O94992 359 aaKnown RBP15.71■□□□□ 0.11
USP44-203ENST00000537435 AFPP02771 609 aaKnown RBP15.71■□□□□ 0.11
USP44-203ENST00000537435 FAM86B2P0C5J1 330 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 UCHL3P15374 230 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 HOXD13P35453 343 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 CARSP49589 748 aaKnown RBP15.71■□□□□ 0.11
USP44-203ENST00000537435 RNASE9P60153 205 aaKnown RBP15.71■□□□□ 0.11
USP44-203ENST00000537435 ICA1Q05084 483 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 DPY19L2P1Q6NXN4 242 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 IRF2BP2Q7Z5L9 587 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 INPP4AQ96PE3 977 aaPredicted RBP15.71■□□□□ 0.11
USP44-203ENST00000537435 RUFY1Q96T51 708 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 EPB41L5Q9HCM4 733 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 GDF3Q9NR23 364 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 KCNQ5Q9NR82 932 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 PI4KBQ9UBF8 816 aa15.71■□□□□ 0.11
USP44-203ENST00000537435 ZSCAN5CA6NGD5 496 aaPredicted RBP15.71■□□□□ 0.1
USP44-203ENST00000537435 SPDYE3A6NKU9 549 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 HSF2BPO75031 334 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.1
USP44-203ENST00000537435 CYP4A11Q02928 519 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 EXOC3L4Q17RC7 722 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 DCAF17Q5H9S7 520 aaPredicted RBP15.71■□□□□ 0.1
USP44-203ENST00000537435 SLC27A3Q5K4L6 730 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 ALS2CLQ60I27 953 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 EPM2AIP1Q7L775 607 aaPredicted RBP15.71■□□□□ 0.1
USP44-203ENST00000537435 ZNF571Q7Z3V5 609 aaPredicted RBP15.71■□□□□ 0.1
USP44-203ENST00000537435 FBXO11Q86XK2 927 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 KRT12Q99456 494 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 DBNDD1Q9H9R9 158 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 PLCB1Q9NQ66 1216 aa15.71■□□□□ 0.1
USP44-203ENST00000537435 ESYT3A0FGR9 886 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 RSPH10B2B2RC85 870 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 F5H6K3 240 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 CALUO43852 315 aaPredicted RBP15.7■□□□□ 0.1
USP44-203ENST00000537435 RSPH10BP0C881 870 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 GUCY2DQ02846 1103 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 KLRC3Q07444 240 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
USP44-203ENST00000537435 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 NNTQ13423 1086 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 POLD4Q9HCU8 107 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 FAM198AQ9UFP1 575 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 NFU1Q9UMS0 254 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 PDXKO00764 312 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 AKAP3O75969 853 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 GDF11O95390 407 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 XRCC5P13010 732 aaKnown RBP15.7■□□□□ 0.1
USP44-203ENST00000537435 PON1P27169 355 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 SREBF1P36956 1147 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 SH3BP5LQ7L8J4 393 aa15.7■□□□□ 0.1
USP44-203ENST00000537435 IFT81Q8WYA0 676 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms