RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TSSK4Q6SA08 328 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 RNF207Q6ZRF8 634 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 PRR23BQ6ZRT6 265 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 PJA1Q8NG27 643 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 PPTC7Q8NI37 304 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 GPR152Q8TDT2 470 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 TCF25Q9BQ70 676 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
CPSF7-217ENST00000537162 GMEB2Q9UKD1 530 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 CNOT1A5YKK6 2376 aaKnown RBP11.27□□□□□ -0.61
CPSF7-217ENST00000537162 LOXHD1Q8IVV2 1947 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 TM4SF5O14894 197 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 N4BP1O75113 896 aaKnown RBP11.26□□□□□ -0.61
CPSF7-217ENST00000537162 CAND2O75155 1236 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 PRDM1O75626 825 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 TOP3BO95985 862 aaKnown RBP11.26□□□□□ -0.61
CPSF7-217ENST00000537162 SLC1A4P43007 532 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 HSDL1Q3SXM5 330 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 PDE12Q6L8Q7 609 aaKnown RBP11.26□□□□□ -0.61
CPSF7-217ENST00000537162 PRR23CQ6ZRP0 262 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 NELL1Q92832 810 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 EMID1Q96A84 441 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-217ENST00000537162 GMCL1Q96IK5 515 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-217ENST00000537162 ENTPD7Q9NQZ7 604 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 SEMA4GQ9NTN9 838 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 SPATA6Q9NWH7 488 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-217ENST00000537162 FBXO4Q9UKT5 387 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 PCDHB12Q9Y5F1 795 aa11.26□□□□□ -0.61
CPSF7-217ENST00000537162 LAMTOR5O43504 91 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 TBC1D4O60343 1298 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 PLA2G6O60733 806 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 CLASP2O75122 1294 aaKnown RBP11.25□□□□□ -0.61
CPSF7-217ENST00000537162 TTLL1O95922 423 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 SLC16A2P36021 539 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
CPSF7-217ENST00000537162 MGAT3Q09327 533 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 ATAT1Q5SQI0 421 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 SPOUT1Q5T280 376 aaKnown RBP11.25□□□□□ -0.61
CPSF7-217ENST00000537162 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 NPAS4Q8IUM7 802 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 AMOTL1Q8IY63 956 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 SLC44A3Q8N4M1 653 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 COLGALT1Q8NBJ5 622 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 ADAM32Q8TC27 787 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
CPSF7-217ENST00000537162 AGO3Q9H9G7 860 aaKnown RBP11.25□□□□□ -0.61
CPSF7-217ENST00000537162 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 ZSCAN32Q9NX65 697 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 WASF3Q9UPY6 502 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 MTF2Q9Y483 593 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-217ENST00000537162 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
CPSF7-217ENST00000537162 IBSPP21815 317 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-217ENST00000537162 TMC5Q6UXY8 1006 aa11.24□□□□□ -0.61
CPSF7-217ENST00000537162 RUFY4Q6ZNE9 571 aa11.24□□□□□ -0.61
CPSF7-217ENST00000537162 MRPS27Q92552 414 aaKnown RBP11.24□□□□□ -0.61
CPSF7-217ENST00000537162 ACSF2Q96CM8 615 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-217ENST00000537162 ARHGEF3Q9NR81 526 aa11.24□□□□□ -0.61
CPSF7-217ENST00000537162 SYNPO2Q9UMS6 1093 aa11.24□□□□□ -0.61
CPSF7-217ENST00000537162 SLC4A4Q9Y6R1 1079 aa11.24□□□□□ -0.61
CPSF7-217ENST00000537162 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 EPCAMP16422 314 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 CD52P31358 61 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 ADAM17P78536 824 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-217ENST00000537162 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 FBXO47Q5MNV8 452 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 RCSD1Q6JBY9 416 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 ST13P5Q8NFI4 369 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-217ENST00000537162 ZCCHC14Q8WYQ9 949 aaKnown RBP11.23□□□□□ -0.61
CPSF7-217ENST00000537162 DDX1Q92499 740 aaKnown RBP11.23□□□□□ -0.61
CPSF7-217ENST00000537162 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 GATA6Q92908 595 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 BORCS6Q96GS4 357 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 TAAR1Q96RJ0 339 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 MPHOSPH6Q99547 160 aaKnown RBP11.23□□□□□ -0.61
CPSF7-217ENST00000537162 BCAS3Q9H6U6 928 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 CWH43Q9H720 699 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 TYW1Q9NV66 732 aaKnown RBP11.23□□□□□ -0.61
CPSF7-217ENST00000537162 COL20A1Q9P218 1284 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 IGSF9Q9P2J2 1179 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
CPSF7-217ENST00000537162 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
CPSF7-217ENST00000537162 C2orf71A6NGG8 1288 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 H3BRB1 525 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 GOLIM4O00461 696 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 LAMA5O15230 3695 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 SRFP11831 508 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 PBX3P40426 434 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 IL31Q6EBC2 164 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 DCLRE1AQ6PJP8 1040 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 OTOP3Q7RTS5 596 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
CPSF7-217ENST00000537162 TUT1Q9H6E5 874 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms