RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MMP14P50281 582 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 PSMC6P62333 389 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 SLC7A5Q01650 507 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 KLRC3Q07444 240 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 TCP10Q12799 353 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 ASIC2Q16515 512 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 C8orf74Q6P047 294 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 TMEM179Q6ZVK1 233 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 SND1Q7KZF4 910 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 EPM2AIP1Q7L775 607 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 GMCL1P1Q8NEA9 526 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 RIN2Q8WYP3 895 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 LENG9Q96B70 501 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 HINFPQ9BQA5 517 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 RBM12Q9NTZ6 932 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 HDAC9Q9UKV0 1011 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 GRID2IPA4D2P6 1211 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 BTNL10A8MVZ5 291 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 CIITAP33076 1130 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 SREBF1P36956 1147 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 MEI1Q5TIA1 1274 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 ALS2CLQ60I27 953 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 FBXO11Q86XK2 927 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM133AQ8N9E0 248 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 GMCL1Q96IK5 515 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 P2RX7Q99572 595 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 TRIM34Q9BYJ4 488 aa17.61■□□□□ 0.41
CHMP1A-202ENST00000535997 CALUO43852 315 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 CASP5P51878 434 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 FKBP1AP62942 108 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 APBA1Q02410 837 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 ARID5AQ03989 594 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 ICA1Q05084 483 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 PABPC4Q13310 644 aaKnown RBP eCLIP17.6■□□□□ 0.414e-8■■□□□ 14.2
CHMP1A-202ENST00000535997 IRF2BP2Q7Z5L9 587 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 IFT20Q8IY31 132 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 CAVIN3Q969G5 261 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 SMARCAL1Q9NZC9 954 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 EHD2Q9NZN4 543 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM86B1E9PN63 330 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 AFPP02771 609 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM86B2P0C5J1 330 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 PDE6BP35913 854 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 MEX3CQ5U5Q3 659 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 DPY19L2P1Q6NXN4 242 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 MS4A14Q96JA4 679 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 REEP2Q9BRK0 252 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 TSPYL1Q9H0U9 437 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 METTL14Q9HCE5 456 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 EP400Q96L91 3159 aa17.6■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 OPA1O60313 960 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 UCHL3P15374 230 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 RPL13P26373 211 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 HOXD13P35453 343 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 NNTQ13423 1086 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 BMT2Q1RMZ1 405 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 STRIP1Q5VSL9 837 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 LRRC31Q6UY01 552 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 KIAA0825Q8IV33 1275 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 FBXL5Q9UKA1 691 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 ANKRD31Q8N7Z5 1873 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 GOLGA6CA6NDK9 693 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 MEIS1O00470 390 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 GOLGA6DP0CG33 693 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 CACNB3P54284 484 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 EXOC3L4Q17RC7 722 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 SH3BP5LQ7L8J4 393 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 SFR1Q86XK3 245 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 FAM76AQ8TAV0 307 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 MASTLQ96GX5 879 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 SH3GL2Q99962 352 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 POLR3CQ9BUI4 534 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 KCNQ5Q9NR82 932 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 GOLGA6AQ9NYA3 693 aa17.59■□□□□ 0.41
CHMP1A-202ENST00000535997 CES2O00748 559 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 CYP3A4P08684 503 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 SLC9A1P19634 815 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 RBM5P52756 815 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 PTK2Q05397 1052 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 PPFIA1Q13136 1202 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 SHROOM1Q2M3G4 852 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 SPAG5Q96R06 1193 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 GDF3Q9NR23 364 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 AFF2P51816 1311 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 ADAMTSL1Q8N6G6 1762 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 GOLGA8KD6RF30 607 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 MSH4O15457 936 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 CLSTN1O94985 981 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 PON1P27169 355 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 ANXA13P27216 316 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 IFI16Q16666 785 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 SYDE2Q5VT97 1194 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 BTNL9Q6UXG8 535 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms