RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 SPATA9Q9BWV2 254 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 TRIM55Q9BYV6 548 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 CCDC9Q9Y3X0 531 aaKnown RBP7.36□□□□□ -1.23
VBP1-203ENST00000535916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.35□□□□□ -1.23
VBP1-203ENST00000535916 GDF5P43026 501 aa7.35□□□□□ -1.23
VBP1-203ENST00000535916 USP10Q14694 798 aaKnown RBP7.35□□□□□ -1.23
VBP1-203ENST00000535916 BTBD8Q5XKL5 378 aa7.35□□□□□ -1.23
VBP1-203ENST00000535916 DPH6Q7L8W6 267 aa7.35□□□□□ -1.23
VBP1-203ENST00000535916 ZNF669Q96BR6 464 aaPredicted RBP7.35□□□□□ -1.23
VBP1-203ENST00000535916 FAM90A27PA6NNH2 459 aa7.34□□□□□ -1.23
VBP1-203ENST00000535916 ADCY3O60266 1144 aa7.34□□□□□ -1.23
VBP1-203ENST00000535916 SLPIP03973 132 aa7.34□□□□□ -1.23
VBP1-203ENST00000535916 DBPQ10586 325 aaPredicted RBP7.34□□□□□ -1.23
VBP1-203ENST00000535916 PAK1Q13153 545 aa7.34□□□□□ -1.23
VBP1-203ENST00000535916 MTDHQ86UE4 582 aaKnown RBP7.34□□□□□ -1.23
VBP1-203ENST00000535916 RIC8BQ9NVN3 520 aa7.34□□□□□ -1.23
VBP1-203ENST00000535916 SRPK3Q9UPE1 567 aa7.34□□□□□ -1.23
VBP1-203ENST00000535916 PTPN1P18031 435 aaKnown RBP7.33□□□□□ -1.24
VBP1-203ENST00000535916 ACVRL1P37023 503 aa7.33□□□□□ -1.24
VBP1-203ENST00000535916 ARHGAP36Q6ZRI8 547 aa7.33□□□□□ -1.24
VBP1-203ENST00000535916 ZFPM1Q8IX07 1006 aa7.33□□□□□ -1.24
VBP1-203ENST00000535916 GIMAP8Q8ND71 665 aaPredicted RBP7.33□□□□□ -1.24
VBP1-203ENST00000535916 NEIL1Q96FI4 390 aaPredicted RBP7.33□□□□□ -1.24
VBP1-203ENST00000535916 SEMA4AQ9H3S1 761 aa7.33□□□□□ -1.24
VBP1-203ENST00000535916 MSRB2Q9Y3D2 182 aa7.33□□□□□ -1.24
VBP1-203ENST00000535916 TESMINQ9Y4I5 508 aa7.33□□□□□ -1.24
VBP1-203ENST00000535916 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 MAN2B1O00754 1011 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 AQP7O14520 342 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 POLD1P28340 1107 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 TOP3AQ13472 1001 aaPredicted RBP7.32□□□□□ -1.24
VBP1-203ENST00000535916 GPR19Q15760 415 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 FOXB2Q5VYV0 432 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 MAMDC2Q7Z304 686 aaPredicted RBP7.32□□□□□ -1.24
VBP1-203ENST00000535916 TAX1BP1Q86VP1 789 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 PCDH19Q8TAB3 1148 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 CARD11Q9BXL7 1154 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 PFDN2Q9UHV9 154 aa7.32□□□□□ -1.24
VBP1-203ENST00000535916 ZFR2Q9UPR6 939 aaKnown RBP7.32□□□□□ -1.24
VBP1-203ENST00000535916 TRBV23-1A0A0A0MS06 115 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 WNT9AO14904 365 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 PDPK1O15530 556 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 FZD7O75084 574 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 AMY2AP04746 511 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
VBP1-203ENST00000535916 AMY2BP19961 511 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 RBM25P49756 843 aaKnown RBP7.31□□□□□ -1.24
VBP1-203ENST00000535916 ZNF568Q3ZCX4 644 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 HS1BP3Q53T59 392 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 FAM209AQ5JX71 171 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 PTRH1Q86Y79 214 aaKnown RBP7.31□□□□□ -1.24
VBP1-203ENST00000535916 SCUBE1Q8IWY4 988 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 CKAP2LQ8IYA6 745 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 NLGN4XQ8N0W4 816 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 PTPRN2Q92932 1015 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 FBXW5Q969U6 566 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 CDC6Q99741 560 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 CATSPERZQ9NTU4 200 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 ARHGAP28Q9P2N2 729 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 CBLCQ9ULV8 474 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 PCDHA8Q9Y5H6 950 aa7.31□□□□□ -1.24
VBP1-203ENST00000535916 CYR61O00622 381 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 STK10O94804 968 aaKnown RBP7.3□□□□□ -1.24
VBP1-203ENST00000535916 PYGMP11217 842 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 PDE6AP16499 860 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 HMGA2P52926 109 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 RRADP55042 308 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 RAC3P60763 192 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 RNF151Q2KHN1 245 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 MTERF2Q49AM1 385 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 OSTM1Q86WC4 334 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 IGSF5Q9NSI5 407 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
VBP1-203ENST00000535916 ARVCFO00192 962 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
VBP1-203ENST00000535916 CUTAO60888 179 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 KRT15P19012 456 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 SUMO1P63165 101 aaKnown RBP7.29□□□□□ -1.24
VBP1-203ENST00000535916 GUCY1A3Q02108 690 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 SSRP1Q08945 709 aaKnown RBP7.29□□□□□ -1.24
VBP1-203ENST00000535916 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 NOLC1Q14978 699 aaKnown RBP eCLIP7.29□□□□□ -1.24
VBP1-203ENST00000535916 WDR72Q3MJ13 1102 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 FIGNQ5HY92 759 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 DPP8Q6V1X1 898 aaPredicted RBP7.29□□□□□ -1.24
VBP1-203ENST00000535916 FUKQ8N0W3 1084 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 ADOQ96SZ5 270 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 MRIQ9BWK5 157 aa7.29□□□□□ -1.24
VBP1-203ENST00000535916 CCDC85CA6NKD9 419 aa7.28□□□□□ -1.24
VBP1-203ENST00000535916 KCNK3O14649 394 aa7.28□□□□□ -1.24
VBP1-203ENST00000535916 DIAPH1O60610 1272 aaKnown RBP7.28□□□□□ -1.24
VBP1-203ENST00000535916 SRGAP2CP0DJJ0 459 aa7.28□□□□□ -1.24
VBP1-203ENST00000535916 JAM2P57087 298 aa7.28□□□□□ -1.24
VBP1-203ENST00000535916 IL13RA1P78552 427 aa7.28□□□□□ -1.24
VBP1-203ENST00000535916 PRKD1Q15139 912 aaPredicted RBP7.28□□□□□ -1.24
VBP1-203ENST00000535916 USP51Q70EK9 711 aa7.28□□□□□ -1.24
VBP1-203ENST00000535916 ZBTB38Q8NAP3 1195 aaPredicted RBP7.28□□□□□ -1.24
VBP1-203ENST00000535916 HS3ST3A1Q9Y663 406 aa7.28□□□□□ -1.24
VBP1-203ENST00000535916 ZNF561-AS1K7EIQ3 104 aa7.27□□□□□ -1.25
VBP1-203ENST00000535916 PTGS1P23219 599 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms