RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ULK1O75385 1050 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 SRGAP2CP0DJJ0 459 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 PFKLP17858 780 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 ATF3P18847 181 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 PMLP29590 882 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 DNM2P50570 870 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 NFKB2Q00653 900 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 MVKQ03426 396 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 CBX2Q14781 532 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-202ENST00000535689 RAB3GAP1Q15042 981 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 INF2Q27J81 1249 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 EMC4Q5J8M3 183 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 TMEM132EQ6IEE7 984 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 NFXL1Q6ZNB6 911 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 CCDC103Q8IW40 242 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 TEX2Q8IWB9 1127 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 ABI1Q8IZP0 508 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 CHST14Q8NCH0 376 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 WDR48Q8TAF3 677 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 WRNIP1Q96S55 665 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 CEP89Q96ST8 783 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 BOCQ9BWV1 1114 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 IPPKQ9H8X2 491 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 KANSL2Q9H9L4 492 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 PRDM7Q9NQW5 492 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 ACSS2Q9NR19 701 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 SIRT5Q9NXA8 310 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 TMEFF2Q9UIK5 374 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-202ENST00000535689 DSEQ9UL01 958 aa4.46□□□□□ -1.7
SNHG1-202ENST00000535689 OAS3Q9Y6K5 1087 aaKnown RBP4.46□□□□□ -1.7
SNHG1-202ENST00000535689 PLXNC1O60486 1568 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 SCAF11Q99590 1463 aaKnown RBP4.45□□□□□ -1.7
SNHG1-202ENST00000535689 BLACEA4D250 179 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 F8W031 263 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-202ENST00000535689 PSPNO60542 156 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 PEX10O60683 326 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 CYP17A1P05093 508 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 CYP4F3Q08477 520 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 ADCY1Q08828 1119 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 TKFCQ3LXA3 575 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 FIGNQ5HY92 759 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 ADGRF1Q5T601 910 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 PIK3R6Q5UE93 754 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 RNF219Q5W0B1 726 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-202ENST00000535689 DENND5AQ6IQ26 1287 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 IGSF22Q8N9C0 903 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 ATL2Q8NHH9 583 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 PCDH19Q8TAB3 1148 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 PLEKHO2Q8TD55 490 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 TSPAN17Q96FV3 270 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 MTA3Q9BTC8 594 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 PCIF1Q9H4Z3 704 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 C19orf44Q9H6X5 657 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 IFT22Q9H7X7 185 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 TNFRSF12AQ9NP84 129 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 APOBEC2Q9Y235 224 aaKnown RBP4.45□□□□□ -1.7
SNHG1-202ENST00000535689 PCDHB4Q9Y5E5 795 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 TNPO3Q9Y5L0 923 aaKnown RBP4.45□□□□□ -1.7
SNHG1-202ENST00000535689 COL4A3BPQ9Y5P4 624 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 ATP23Q9Y6H3 246 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 SRCAPQ6ZRS2 3230 aa4.45□□□□□ -1.7
SNHG1-202ENST00000535689 TMEM94Q12767 1356 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 CLASP2O75122 1294 aaKnown RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 RAB11FIP3O75154 756 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 DNAJC8O75937 253 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 NTRK1P04629 796 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 DBHP09172 617 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 GLI4P10075 376 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 NCAM1P13591 858 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 LCP1P13796 627 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 KPNA1P52294 538 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 TMEM177Q53S58 311 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 ARHGAP36Q6ZRI8 547 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 CBLL1Q75N03 491 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 MILR1Q7Z6M3 343 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 TTLL11Q8NHH1 800 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 UHMK1Q8TAS1 419 aaKnown RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 LEO1Q8WVC0 666 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 FAM168AQ92567 244 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 CLUHP3Q96NS8 147 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 KCNJ15Q99712 375 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 PDGFDQ9GZP0 370 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 RNF38Q9H0F5 515 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 TYW1Q9NV66 732 aaKnown RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 MYOTQ9UBF9 498 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 B4GALT6Q9UBX8 382 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 ZC3H13Q5T200 1668 aaKnown RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 INO80Q9ULG1 1556 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-202ENST00000535689 AFF2P51816 1311 aa4.44□□□□□ -1.7
SNHG1-202ENST00000535689 SYCP2Q9BX26 1530 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 GPATCH8Q9UKJ3 1502 aaKnown RBP4.43□□□□□ -1.7
SNHG1-202ENST00000535689 SHPRHQ149N8 1683 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 GSG1L2A8MUP6 293 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 M0R2C6 588 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 PPM1GO15355 546 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-202ENST00000535689 SEMA7AO75326 666 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 RASGRP1O95267 797 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 PYGMP11217 842 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 IL2P60568 153 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms