RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 NCAPH2Q6IBW4 605 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 FAM200AQ8TCP9 573 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 COPS5Q92905 334 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 HSD17B14Q9BPX1 270 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 MMTAG2Q9BU76 263 aaKnown RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 DISC1Q9NRI5 854 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 PAXBP1Q9Y5B6 917 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 DDX39AO00148 427 aaKnown RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 ADCY6O43306 1168 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 UBA7P41226 1012 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 ACTR2P61160 394 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 NKX3-2P78367 333 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 KRT79Q5XKE5 535 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 FBXO46Q6PJ61 603 aaPredicted RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 ABHD15Q6UXT9 468 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 MIER3Q7Z3K6 550 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 ERMNQ8TAM6 284 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 SEPT1Q8WYJ6 367 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 MRPS27Q92552 414 aaKnown RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 SYMPKQ92797 1274 aaKnown RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 EPSTI1Q96J88 318 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 POLR3CQ9BUI4 534 aaPredicted RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
SCARB1-204ENST00000535005 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 IGKV6D-21A0A0A0MT36 114 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 GSTTP1A0A1W2PQM5 241 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
SCARB1-204ENST00000535005 CHMP2AO43633 222 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 MUTP22033 750 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 RPA1P27694 616 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 CDC25AP30304 524 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 SPECC1Q5M775 1068 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 HYIQ5T013 277 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 GJC2Q5T442 439 aaPredicted RBP13.75□□□□□ -0.21
SCARB1-204ENST00000535005 HAUS3Q68CZ6 603 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 CABP7Q86V35 215 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 CREBRFQ8IUR6 639 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 FSIP1Q8NA03 581 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 SPATA33Q96N06 139 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 GPR20Q99678 358 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
SCARB1-204ENST00000535005 TUFT1Q9NNX1 390 aa13.75□□□□□ -0.21
SCARB1-204ENST00000535005 P4HBP07237 508 aaKnown RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 PSAPP07602 524 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 SUPT20HL2P0C7V6 817 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 HOXD8P13378 290 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 CCND3P30281 292 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 TXLNAP40222 546 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 HSDL1Q3SXM5 330 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 MIS18BP1Q6P0N0 1132 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 PPTC7Q8NI37 304 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 SNX29Q8TEQ0 813 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 UPF3AQ9H1J1 476 aaKnown RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 A0A1B0GVL5 298 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 A6NJR5 290 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 MSCO60682 206 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 SLITRK3O94933 977 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 SPATA31C1P0DKV0 1188 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 PFKFB1P16118 471 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 GJA9P57773 515 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 ENGASEQ8NFI3 743 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 ZNF830Q96NB3 372 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 PYM1Q9BRP8 204 aaKnown RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 KCNF1Q9H3M0 494 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 GOLPH3LQ9H4A5 285 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 HMX1Q9NP08 348 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-204ENST00000535005 TELO2Q9Y4R8 837 aa13.74□□□□□ -0.21
SCARB1-204ENST00000535005 KDM3AQ9Y4C1 1321 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 HTTP42858 3142 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 NOP56O00567 594 aaKnown RBP13.73□□□□□ -0.21
SCARB1-204ENST00000535005 PPFIA4O75335 1185 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 MED24O75448 989 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 LGR5O75473 907 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 LYPLA2O95372 231 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 CNGA1P29973 690 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 CCT6AP40227 531 aaKnown RBP13.73□□□□□ -0.21
SCARB1-204ENST00000535005 CBX1P83916 185 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 GRB10Q13322 594 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 SLC9C1Q4G0N8 1177 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 TLK2Q86UE8 772 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 CATSPER3Q86XQ3 398 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 SH3TC2Q8TF17 1288 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 AFG1LQ8WV93 481 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 DYDC2Q96IM9 177 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 DDX20Q9UHI6 824 aaKnown RBP13.73□□□□□ -0.21
SCARB1-204ENST00000535005 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms