RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 ST13P5Q8NFI4 369 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-205ENST00000533776 SH3RF2Q8TEC5 729 aa4.79□□□□□ -1.64
BRCA2-205ENST00000533776 SEC61A2Q9H9S3 476 aa4.79□□□□□ -1.64
BRCA2-205ENST00000533776 FOXS1O43638 330 aa4.78□□□□□ -1.64
BRCA2-205ENST00000533776 USP10Q14694 798 aaKnown RBP4.78□□□□□ -1.64
BRCA2-205ENST00000533776 ZNF568Q3ZCX4 644 aa4.78□□□□□ -1.64
BRCA2-205ENST00000533776 MTDHQ86UE4 582 aaKnown RBP4.78□□□□□ -1.64
BRCA2-205ENST00000533776 REXO1L1PQ8IX06 675 aa4.78□□□□□ -1.64
BRCA2-205ENST00000533776 SLC43A3Q8NBI5 491 aa4.78□□□□□ -1.64
BRCA2-205ENST00000533776 GIMAP8Q8ND71 665 aaPredicted RBP4.78□□□□□ -1.64
BRCA2-205ENST00000533776 GMLQ99445 158 aa4.78□□□□□ -1.64
BRCA2-205ENST00000533776 TRIM55Q9BYV6 548 aa4.78□□□□□ -1.64
BRCA2-205ENST00000533776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-205ENST00000533776 TCRBV5S4A2TA0A5A2 114 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 CYR61O00622 381 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 ACVRL1P37023 503 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 RRADP55042 308 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 RAB33AQ14088 237 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 BTBD8Q5XKL5 378 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 TCTN3Q6NUS6 607 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 DPH6Q7L8W6 267 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 PDGFDQ9GZP0 370 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-205ENST00000533776 KATNBL1Q9H079 304 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 SEMA4AQ9H3S1 761 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 RIC8BQ9NVN3 520 aa4.77□□□□□ -1.65
BRCA2-205ENST00000533776 ZFR2Q9UPR6 939 aaKnown RBP4.77□□□□□ -1.65
BRCA2-205ENST00000533776 ESYT3A0FGR9 886 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 FZD7O75084 574 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 DBPQ10586 325 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-205ENST00000533776 HS1BP3Q53T59 392 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 USP51Q70EK9 711 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 SPATC1Q76KD6 591 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 TAX1BP1Q86VP1 789 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 NEIL1Q96FI4 390 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-205ENST00000533776 SPATA9Q9BWV2 254 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 CARD11Q9BXL7 1154 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 ARHGAP28Q9P2N2 729 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 SRPK3Q9UPE1 567 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 HS3ST3A1Q9Y663 406 aa4.76□□□□□ -1.65
BRCA2-205ENST00000533776 FAM90A27PA6NNH2 459 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 PTPN1P18031 435 aaKnown RBP4.75□□□□□ -1.65
BRCA2-205ENST00000533776 KRT15P19012 456 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 POLD1P28340 1107 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 PAK1Q13153 545 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 WDR72Q3MJ13 1102 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 ARHGAP36Q6ZRI8 547 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 ADOQ96SZ5 270 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 CDC6Q99741 560 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 ZNF341Q9BYN7 854 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 CATSPERZQ9NTU4 200 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 PFDN2Q9UHV9 154 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 CCDC9Q9Y3X0 531 aaKnown RBP4.75□□□□□ -1.65
BRCA2-205ENST00000533776 TESMINQ9Y4I5 508 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 PCDHA8Q9Y5H6 950 aa4.75□□□□□ -1.65
BRCA2-205ENST00000533776 CCDC85CA6NKD9 419 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 AQP7O14520 342 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 KCNK3O14649 394 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 STK10O94804 968 aaKnown RBP4.74□□□□□ -1.65
BRCA2-205ENST00000533776 SRGAP2CP0DJJ0 459 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 PYGMP11217 842 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 RAC3P60763 192 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 GUCY1A3Q02108 690 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 TOP3AQ13472 1001 aaPredicted RBP4.74□□□□□ -1.65
BRCA2-205ENST00000533776 NOLC1Q14978 699 aaKnown RBP eCLIP4.74□□□□□ -1.65
BRCA2-205ENST00000533776 PRKD1Q15139 912 aaPredicted RBP4.74□□□□□ -1.65
BRCA2-205ENST00000533776 GPR19Q15760 415 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 RNF151Q2KHN1 245 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 DPP8Q6V1X1 898 aaPredicted RBP4.74□□□□□ -1.65
BRCA2-205ENST00000533776 EP400NLQ6ZTU2 488 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 MAMDC2Q7Z304 686 aaPredicted RBP4.74□□□□□ -1.65
BRCA2-205ENST00000533776 PTRH1Q86Y79 214 aaKnown RBP4.74□□□□□ -1.65
BRCA2-205ENST00000533776 FUKQ8N0W3 1084 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 NLGN4XQ8N0W4 816 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 FBXW5Q969U6 566 aa4.74□□□□□ -1.65
BRCA2-205ENST00000533776 TRBV23-1A0A0A0MS06 115 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 PRAMEF25A6NGN4 478 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 MAN2B1O00754 1011 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 U2SURPO15042 1029 aaKnown RBP4.73□□□□□ -1.65
BRCA2-205ENST00000533776 PDPK1O15530 556 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 ADCY3O60266 1144 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 CUTAO60888 179 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 AMY2AP04746 511 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 PDE6AP16499 860 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 AMY2BP19961 511 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 MC4RP32245 332 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 ADCY8P40145 1251 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 RBM25P49756 843 aaKnown RBP4.73□□□□□ -1.65
BRCA2-205ENST00000533776 KLF10Q13118 480 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 NRN1LQ496H8 165 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 MTERF2Q49AM1 385 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 ZMAT1Q5H9K5 638 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 FIGNQ5HY92 759 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 FAM209AQ5JX71 171 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 FOXB2Q5VYV0 432 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 OSTM1Q86WC4 334 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 CKAP2LQ8IYA6 745 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 PCDH19Q8TAB3 1148 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 PTPRN2Q92932 1015 aa4.73□□□□□ -1.65
BRCA2-205ENST00000533776 ZNF669Q96BR6 464 aaPredicted RBP4.73□□□□□ -1.65
BRCA2-205ENST00000533776 DPYSL5Q9BPU6 564 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms