RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.17	□□□□□ -0.3
ATM-222	ENST00000533733	MACROD2	A1Z1Q3	448 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	SPDYE2B	A6NHP3	402 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	FAM86B1	E9PN63	330 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	ENC1	O14682	589 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	PPIP5K2	O43314	1243 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	CLSTN1	O94985	981 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	AFP	P02771	609 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	FAM86B2	P0C5J1	330 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	POLR2M	P0CAP2	368 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	SPDYE6	P0CI01	402 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	EPB41	P11171	864 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	NR2F2	P24468	414 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	PAFAH1B1	P43034	410 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	VSNL1	P62760	191 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	CYP27A1	Q02318	531 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	PPP2R5C	Q13362	524 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	SLC18A3	Q16572	532 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	AOC3	Q16853	763 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	GLE1	Q53GS7	698 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	TDRD12	Q587J7	1177 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	HSP90B2P	Q58FF3	399 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	SAMD3	Q8N6K7	520 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	NOA1	Q8NC60	698 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	MTMR14	Q8NCE2	650 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	EXOC4	Q96A65	974 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	PSMD1	Q99460	953 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	MKNK1	Q9BUB5	465 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	LSM14B	Q9BX40	385 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	RANBP17	Q9H2T7	1088 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	FAM196B	A6NMK8	535 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	EPHB6	O15197	1021 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	GFPT2	O94808	682 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	NOL4	O94818	638 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	CYP2C19	P33261	490 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	KCNH2	Q12809	1159 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	USH1G	Q495M9	461 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	GLIS3	Q8NEA6	775 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	GOLGA5	Q8TBA6	731 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	FAM71B	Q8TC56	605 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	PRMT6	Q96LA8	375 aa	Predicted RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	MMS19	Q96T76	1030 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.16	□□□□□ -0.3
ATM-222	ENST00000533733	REEP2	Q9BRK0	252 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	GINM1	Q9NU53	330 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	PNMA2	Q9UL42	364 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	ODF2L	Q9ULJ1	636 aa		13.16	□□□□□ -0.3
ATM-222	ENST00000533733	IGLV3-22	A0A075B6J6	115 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	CES2	O00748	559 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	PLEK	P08567	350 aa	Predicted RBP	13.15	□□□□□ -0.3
ATM-222	ENST00000533733	XRCC5	P13010	732 aa	Known RBP	13.15	□□□□□ -0.3
ATM-222	ENST00000533733	STAT3	P40763	770 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	POLR2F	P61218	127 aa	Known RBP	13.15	□□□□□ -0.3
ATM-222	ENST00000533733	CASP8	Q14790	479 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	ASIC2	Q16515	512 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	FAM83A	Q86UY5	434 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	NELFCD	Q8IXH7	590 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	OGFOD1	Q8N543	542 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	SLC5A5	Q92911	643 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	GAN	Q9H2C0	597 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	VCPKMT	Q9H867	229 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	HDAC6	Q9UBN7	1215 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	FEM1B	Q9UK73	627 aa		13.15	□□□□□ -0.3
ATM-222	ENST00000533733	GRID2IP	A4D2P6	1211 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	OPLAH	O14841	1288 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	VIL1	P09327	827 aa	Known RBP	13.14	□□□□□ -0.31
ATM-222	ENST00000533733	TNFRSF8	P28908	595 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	PRKCI	P41743	596 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	PRELP	P51888	382 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
ATM-222	ENST00000533733	MYBPC2	Q14324	1141 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	DLGAP5	Q15398	846 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	SPDYE2	Q495Y8	402 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	CCDC181	Q5TID7	509 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	OTOP1	Q7RTM1	612 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	VPS36	Q86VN1	386 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	SFR1	Q86XK3	245 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	CREG2	Q8IUH2	290 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.14	□□□□□ -0.31
ATM-222	ENST00000533733	NACC1	Q96RE7	527 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	OSBPL9	Q96SU4	736 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	HSD17B14	Q9BPX1	270 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	ZHX3	Q9H4I2	956 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	MAP3K20	Q9NYL2	800 aa	Known RBP	13.14	□□□□□ -0.31
ATM-222	ENST00000533733	ZBTB21	Q9ULJ3	1066 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	PCDHAC2	Q9Y5I4	1007 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	FRMPD4	Q14CM0	1322 aa		13.14	□□□□□ -0.31
ATM-222	ENST00000533733	NKRF	O15226	690 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
ATM-222	ENST00000533733	PSMD10	O75832	226 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	FAM13A	O94988	1023 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	AARS	P49588	968 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
ATM-222	ENST00000533733	KLHL30	Q0D2K2	578 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	ALCAM	Q13740	583 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	NAB2	Q15742	525 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	EXOC3L4	Q17RC7	722 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	LRCH2	Q5VUJ6	765 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	GBP6	Q6ZN66	633 aa		13.13	□□□□□ -0.31
ATM-222	ENST00000533733	NIPA1	Q7RTP0	329 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms