RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DHX16O60231 1041 aaKnown RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 STAM2O75886 525 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 PARP1P09874 1014 aaKnown RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 HOXA13P31271 388 aaPredicted RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 MRPS9P82933 396 aaKnown RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 KCNC3Q14003 757 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 GNPTABQ3T906 1256 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 TSHZ1Q6ZSZ6 1077 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 CYFIP1Q7L576 1253 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 RTN4RL1Q86UN2 441 aaPredicted RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 ZNF589Q86UQ0 364 aaPredicted RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 IQCA1Q86XH1 822 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 NPAS4Q8IUM7 802 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 VN1R2Q8NFZ6 395 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 INPP4AQ96PE3 977 aaPredicted RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 CDCA3Q99618 268 aaPredicted RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 S1PR5Q9H228 398 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 AGO3Q9H9G7 860 aaKnown RBP9.05□□□□□ -0.96
NXF1-215ENST00000533440 TELO2Q9Y4R8 837 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 FRMPD4Q14CM0 1322 aa9.05□□□□□ -0.96
NXF1-215ENST00000533440 FSD2A1L4K1 749 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 MBLAC1A4D2B0 266 aaPredicted RBP9.04□□□□□ -0.96
NXF1-215ENST00000533440 GCOM1H8Y6P7 765 aaPredicted RBP9.04□□□□□ -0.96
NXF1-215ENST00000533440 ZBTB5O15062 677 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 KDM4AO75164 1064 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 POLR2MP0CAP2 368 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 ID4P47928 161 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 RBM10P98175 930 aaKnown RBP9.04□□□□□ -0.96
NXF1-215ENST00000533440 UBE3AQ05086 875 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 DUSP6Q16828 381 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 TMEM184AQ6ZMB5 413 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 RSPH3Q86UC2 560 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 ENAHQ8N8S7 591 aaPredicted RBP9.04□□□□□ -0.96
NXF1-215ENST00000533440 NEK1Q96PY6 1258 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
NXF1-215ENST00000533440 SENP7Q9BQF6 1050 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 FTHL17Q9BXU8 183 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 TLE6Q9H808 572 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 PCDHA1Q9Y5I3 950 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 CDY2AQ9Y6F7 541 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 SQORQ9Y6N5 450 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 PLXNA4Q9HCM2 1894 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 KAT6AQ92794 2004 aa9.04□□□□□ -0.96
NXF1-215ENST00000533440 DOCK5Q9H7D0 1870 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 TRIM6-TRIM34B2RNG4 842 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 PER2O15055 1255 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 FIBPO43427 364 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 STAG3L1P0CL83 205 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 CD52P31358 61 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 NMIQ13287 307 aaPredicted RBP9.03□□□□□ -0.96
NXF1-215ENST00000533440 PAN2Q504Q3 1202 aaKnown RBP9.03□□□□□ -0.96
NXF1-215ENST00000533440 MARCH8Q5T0T0 291 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 UTP14CQ5TAP6 766 aaKnown RBP9.03□□□□□ -0.96
NXF1-215ENST00000533440 FCHSD1Q86WN1 690 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 UBALD2Q8IYN6 164 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 TMEM105Q8N8V8 129 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 RASGRP4Q8TDF6 673 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 DNAJB3Q8WWF6 145 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 TUBE1Q9UJT0 475 aa9.03□□□□□ -0.96
NXF1-215ENST00000533440 PALM3A6NDB9 673 aaPredicted RBP9.02□□□□□ -0.97
NXF1-215ENST00000533440 KLRF2D3W0D1 207 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 ZNF213O14771 459 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 FSCN2O14926 492 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 RPLP2P05387 115 aaKnown RBP9.02□□□□□ -0.97
NXF1-215ENST00000533440 SCG2P13521 617 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 ERVFC1P60507 584 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 MRPS6P82932 125 aaKnown RBP9.02□□□□□ -0.97
NXF1-215ENST00000533440 TRAF1Q13077 416 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 PPFIA1Q13136 1202 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 GRIK4Q16099 956 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 SLC35G1Q2M3R5 365 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 PDE12Q6L8Q7 609 aaKnown RBP9.02□□□□□ -0.97
NXF1-215ENST00000533440 ANKRD54Q6NXT1 300 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 SYCE2Q6PIF2 218 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 KREMEN2Q8NCW0 462 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 MICAL1Q8TDZ2 1067 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 NKD2Q969F2 451 aaPredicted RBP9.02□□□□□ -0.97
NXF1-215ENST00000533440 RTEL1Q9NZ71 1219 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 ZSWIM5Q9P217 1185 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 RCAN3Q9UKA8 241 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 PADI3Q9ULW8 664 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 SORCS3Q9UPU3 1222 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 ZNF292O60281 2723 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 WDR87Q6ZQQ6 2873 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
NXF1-215ENST00000533440 LAMA4Q16363 1823 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 B4E1Z4 1266 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 BRD1O95696 1058 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 TCF7P36402 384 aaPredicted RBP9.01□□□□□ -0.97
NXF1-215ENST00000533440 GATMP50440 423 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 PDE1AP54750 535 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 MTMR3Q13615 1198 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 IER5Q5VY09 327 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 FAM43BQ6ZT52 329 aaPredicted RBP9.01□□□□□ -0.97
NXF1-215ENST00000533440 FRMD5Q7Z6J6 570 aa9.01□□□□□ -0.97
NXF1-215ENST00000533440 ZBTB33Q86T24 672 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms