RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CD4P01730 458 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 PSAPP07602 524 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 MARK3P27448 753 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 JAK3P52333 1124 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 RESTQ13127 1097 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 PPP2R5CQ13362 524 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 PLPPR4Q7Z2D5 763 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 BRAPQ7Z569 592 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 C4orf32Q8N8J7 132 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 ZNF302Q9NR11 478 aa27.98■■■□□ 2.07
USP48-214ENST00000532737 EML1O00423 815 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 SMIM10L2AP0DMW4 78 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 SMIM10L2BP0DMW5 78 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 SFNP31947 248 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 TXKP42681 527 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 HIC1Q14526 733 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 FAM160B1Q5W0V3 765 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 GDF6Q6KF10 455 aaPredicted RBP27.97■■■□□ 2.07
USP48-214ENST00000532737 MIER3Q7Z3K6 550 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 SH3RF1Q7Z6J0 888 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 AFAP1L1Q8TED9 768 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 PDLIM7Q9NR12 457 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.97■■■□□ 2.07
USP48-214ENST00000532737 GTF2IRD1Q9UHL9 959 aa27.97■■■□□ 2.07
USP48-214ENST00000532737 ZMYND8Q9ULU4 1186 aaPredicted RBP27.97■■■□□ 2.07
USP48-214ENST00000532737 TLR3O15455 904 aaKnown RBP27.96■■■□□ 2.07
USP48-214ENST00000532737 CLTBP09497 229 aa27.96■■■□□ 2.07
USP48-214ENST00000532737 SPIRE1Q08AE8 756 aa27.96■■■□□ 2.07
USP48-214ENST00000532737 RDM1Q8NG50 284 aa27.96■■■□□ 2.07
USP48-214ENST00000532737 GDF15Q99988 308 aa27.96■■■□□ 2.07
USP48-214ENST00000532737 TTC12Q9H892 705 aaPredicted RBP27.96■■■□□ 2.07
USP48-214ENST00000532737 GABBR1Q9UBS5 961 aa27.96■■■□□ 2.07
USP48-214ENST00000532737 PCDHA12Q9UN75 941 aa27.96■■■□□ 2.07
USP48-214ENST00000532737 MAFBQ9Y5Q3 323 aaPredicted RBP27.96■■■□□ 2.07
USP48-214ENST00000532737 TRIM43BA6NCK2 446 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 OR52Z1P0C646 297 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 SYN1P17600 705 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 ATP4AP20648 1035 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 ZNF200P98182 395 aaPredicted RBP27.95■■■□□ 2.06
USP48-214ENST00000532737 PLCB4Q15147 1175 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 PDXDC2PQ6P474 469 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 TRIM43Q96BQ3 446 aaPredicted RBP27.95■■■□□ 2.06
USP48-214ENST00000532737 CTAGE1Q96RT6 745 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 PRDM5Q9NQX1 630 aaPredicted RBP27.95■■■□□ 2.06
USP48-214ENST00000532737 TMEM39AQ9NV64 488 aa27.95■■■□□ 2.06
USP48-214ENST00000532737 SOX1O00570 391 aaPredicted RBP27.94■■■□□ 2.06
USP48-214ENST00000532737 PTGDRQ13258 359 aa27.94■■■□□ 2.06
USP48-214ENST00000532737 PTGISQ16647 500 aa27.94■■■□□ 2.06
USP48-214ENST00000532737 SETD4Q9NVD3 440 aa27.94■■■□□ 2.06
USP48-214ENST00000532737 TBX21Q9UL17 535 aa27.94■■■□□ 2.06
USP48-214ENST00000532737 HOXC8P31273 242 aa27.93■■■□□ 2.06
USP48-214ENST00000532737 SLC26A2P50443 739 aa27.93■■■□□ 2.06
USP48-214ENST00000532737 UGCGQ16739 394 aa27.93■■■□□ 2.06
USP48-214ENST00000532737 NCAPH2Q6IBW4 605 aa27.93■■■□□ 2.06
USP48-214ENST00000532737 FAM173BQ6P4H8 233 aa27.93■■■□□ 2.06
USP48-214ENST00000532737 IGSF9BQ9UPX0 1349 aa27.92■■■□□ 2.06
USP48-214ENST00000532737 C17orf102A2RUQ5 167 aa27.92■■■□□ 2.06
USP48-214ENST00000532737 KIAA0355O15063 1070 aa27.92■■■□□ 2.06
USP48-214ENST00000532737 ZNF862O60290 1169 aa27.92■■■□□ 2.06
USP48-214ENST00000532737 CYP2C9P11712 490 aa27.92■■■□□ 2.06
USP48-214ENST00000532737 BMP8BP34820 402 aa27.92■■■□□ 2.06
USP48-214ENST00000532737 INSRRP14616 1297 aa27.91■■■□□ 2.06
USP48-214ENST00000532737 PPFIA1Q13136 1202 aa27.91■■■□□ 2.06
USP48-214ENST00000532737 PKP1Q13835 747 aa27.91■■■□□ 2.06
USP48-214ENST00000532737 EPHA7Q15375 998 aa27.91■■■□□ 2.06
USP48-214ENST00000532737 FOXD4L5Q5VV16 416 aaPredicted RBP27.91■■■□□ 2.06
USP48-214ENST00000532737 ATP8B4Q8TF62 1192 aa27.91■■■□□ 2.06
USP48-214ENST00000532737 LMBR1Q8WVP7 490 aa27.91■■■□□ 2.06
USP48-214ENST00000532737 FOXD4L4Q8WXT5 416 aaPredicted RBP27.91■■■□□ 2.06
USP48-214ENST00000532737 ZSCAN16Q9H4T2 348 aaPredicted RBP27.91■■■□□ 2.06
USP48-214ENST00000532737 TRPC6Q9Y210 931 aa27.91■■■□□ 2.06
USP48-214ENST00000532737 POTEB3A0JP26 581 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 PDIA4P13667 645 aaKnown RBP27.9■■■□□ 2.06
USP48-214ENST00000532737 TECP42680 631 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 ADAM17P78536 824 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 GRIK4Q16099 956 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 POTEBQ6S5H4 581 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 CKAP2LQ8IYA6 745 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 PRKAG2Q9UGJ0 569 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 NOD1Q9Y239 953 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 NRCAMQ92823 1304 aa27.9■■■□□ 2.06
USP48-214ENST00000532737 TREHO43280 583 aa27.89■■■□□ 2.06
USP48-214ENST00000532737 ZSCAN22P10073 491 aaPredicted RBP27.89■■■□□ 2.06
USP48-214ENST00000532737 ITGB8P26012 769 aa27.89■■■□□ 2.06
USP48-214ENST00000532737 TRMT1LQ7Z2T5 733 aaKnown RBP27.89■■■□□ 2.06
USP48-214ENST00000532737 BANK1Q8NDB2 785 aa27.89■■■□□ 2.06
USP48-214ENST00000532737 LRCH3Q96II8 777 aa27.89■■■□□ 2.06
USP48-214ENST00000532737 RGL1Q9NZL6 768 aa27.89■■■□□ 2.06
USP48-214ENST00000532737 POTEMA6NI47 508 aa27.88■■■□□ 2.05
USP48-214ENST00000532737 HBP1O60381 514 aa27.88■■■□□ 2.05
USP48-214ENST00000532737 GNAT1P11488 350 aa27.88■■■□□ 2.05
USP48-214ENST00000532737 ATP2C1P98194 919 aaPredicted RBP27.88■■■□□ 2.05
USP48-214ENST00000532737 IL17AQ16552 155 aa27.88■■■□□ 2.05
USP48-214ENST00000532737 MARCH8Q5T0T0 291 aa27.88■■■□□ 2.05
USP48-214ENST00000532737 DHX38Q92620 1227 aaKnown RBP27.88■■■□□ 2.05
USP48-214ENST00000532737 ATP6V0A1Q93050 837 aa27.88■■■□□ 2.05
USP48-214ENST00000532737 NOC4LQ9BVI4 516 aaKnown RBP27.88■■■□□ 2.05
USP48-214ENST00000532737 LAD1O00515 517 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 STBD1O95210 358 aa27.87■■■□□ 2.05
USP48-214ENST00000532737 PSMC5P62195 406 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms