RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ZNF467Q7Z7K2 595 aaPredicted RBP24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 BANK1Q8NDB2 785 aa24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 CDHR1Q96JP9 859 aa24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 GSDMAQ96QA5 445 aa24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 LOC102724159A0A0B4J2E5 919 aa24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 RPN1P04843 607 aaKnown RBP24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 PLA2G4BP0C869 781 aa24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 PWP2Q15269 919 aaKnown RBP24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 TMEM63BQ5T3F8 832 aa24.54■■□□□ 1.52
PACSIN3-209ENST00000532457 HTTP42858 3142 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 NFASCO94856 1347 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 ARIH2O95376 493 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 ZNF165P49910 485 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 MRE11P49959 708 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 SLC12A3P55017 1021 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 ARSHQ5FYA8 562 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 LUZP1Q86V48 1076 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 MSL3Q8N5Y2 521 aaKnown RBP24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 NPLOC4Q8TAT6 608 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 PIGOQ8TEQ8 1089 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 MAML3Q96JK9 1138 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 SENP7Q9BQF6 1050 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 PTPN22Q9Y2R2 807 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 PLXNA1Q9UIW2 1896 aa24.53■■□□□ 1.52
PACSIN3-209ENST00000532457 ASB14A6NK59 587 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 IQCB1Q15051 598 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 LY6KQ17RY6 165 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 ARMCX2Q7L311 632 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 CYFIP1Q7L576 1253 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 FBXO16Q8IX29 292 aaPredicted RBP24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 PXYLP1Q8TE99 480 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 PDGFCQ9NRA1 345 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 DNM3Q9UQ16 869 aa24.52■■□□□ 1.52
PACSIN3-209ENST00000532457 KRT76Q01546 638 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 UGCGQ16739 394 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 KMT5BQ4FZB7 885 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 OLFML2BQ68BL8 750 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 DYMQ7RTS9 669 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 FAM200AQ8TCP9 573 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 LXNQ9BS40 222 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 SAMM50Q9Y512 469 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 NPHP3-ACAD11A0A0J9YXS1 232 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 ADCY3O60266 1144 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 SSBP05455 408 aaKnown RBP eCLIP24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 MYL1P05976 194 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 P4HBP07237 508 aaKnown RBP24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 UBA1P22314 1058 aaKnown RBP24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 ZNF746Q6NUN9 644 aaPredicted RBP24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 SMYD4Q8IYR2 804 aaPredicted RBP24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 SLAIN1Q8ND83 568 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 DDX12PQ92771 950 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 DNAJC19Q96DA6 116 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 SLC9A2Q9UBY0 812 aa24.51■■□□□ 1.51
PACSIN3-209ENST00000532457 SNAI1O95863 264 aaPredicted RBP24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 CD44P16070 742 aaKnown RBP24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 DEKP35659 375 aaKnown RBP24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 AMPD3Q01432 767 aa24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 SP4Q02446 784 aa24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 MAMDC4Q6UXC1 1216 aa24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 SYT2Q8N9I0 419 aaPredicted RBP24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 TRIML1Q8N9V2 468 aa24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 TINF2Q9BSI4 451 aa24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 JPH1Q9HDC5 661 aaPredicted RBP24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 DDX41Q9UJV9 622 aaKnown RBP24.5■■□□□ 1.51
PACSIN3-209ENST00000532457 EYA4O95677 639 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 CYP11B2P19099 503 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 PTGS1P23219 599 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 CCDC62Q6P9F0 684 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 DHX40Q8IX18 779 aaKnown RBP24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 BHMT2Q9H2M3 363 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 PTCH2Q9Y6C5 1203 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 WDR64B1ANS9 1081 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 TGFB3P10600 412 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 JAK3P52333 1124 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 ACTR2P61160 394 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 ASIC1P78348 528 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 TAPT1Q6NXT6 567 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 CNNM4Q6P4Q7 775 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 FBXO46Q6PJ61 603 aaPredicted RBP24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 ABHD15Q6UXT9 468 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 KATNBL1Q9H079 304 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 PCDHA10Q9Y5I2 948 aa24.49■■□□□ 1.51
PACSIN3-209ENST00000532457 SYNGAP1Q96PV0 1343 aa24.48■■□□□ 1.51
PACSIN3-209ENST00000532457 MUTP22033 750 aa24.48■■□□□ 1.51
PACSIN3-209ENST00000532457 SFNP31947 248 aa24.48■■□□□ 1.51
PACSIN3-209ENST00000532457 QARSP47897 775 aaKnown RBP24.48■■□□□ 1.51
PACSIN3-209ENST00000532457 MFSD14CQ5VZR4 134 aa24.48■■□□□ 1.51
PACSIN3-209ENST00000532457 GPBP1Q86WP2 473 aa24.48■■□□□ 1.51
PACSIN3-209ENST00000532457 MED15Q96RN5 788 aa24.48■■□□□ 1.51
PACSIN3-209ENST00000532457 PPP1R3GB7ZBB8 358 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 FARP2O94887 1054 aaPredicted RBP24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 GRK4P32298 578 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 KCNB1Q14721 858 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 CCL14Q16627 93 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 NEK9Q8TD19 979 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 HPS3Q969F9 1004 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 NACC1Q96RE7 527 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 ZSWIM4Q9H7M6 989 aa24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.47■■□□□ 1.51
PACSIN3-209ENST00000532457 GDAQ9Y2T3 454 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms