RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 DGAT1O75907 488 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 VCAM1P19320 739 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 GSDMBQ8TAX9 411 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 CCDC127Q96BQ5 260 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 WNK4Q96J92 1243 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 GSDMAQ96QA5 445 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 RIT2Q99578 217 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 NCAPGQ9BPX3 1015 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 CCDC77Q9BR77 488 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.37
CSRP1-215ENST00000532313 CLSTN2Q9H4D0 955 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 PAK2Q13177 524 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 ZNF568Q3ZCX4 644 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 PADI6Q6TGC4 694 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 UBL4BQ8N7F7 174 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 SERTAD1Q9UHV2 236 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 ATP11BQ9Y2G3 1177 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 PPME1Q9Y570 386 aa12.71□□□□□ -0.37
CSRP1-215ENST00000532313 RHPN2Q8IUC4 686 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 KIF18AQ8NI77 898 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.38
CSRP1-215ENST00000532313 TXNDC16Q9P2K2 825 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 GPR182O15218 404 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 CYP2C9P11712 490 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 E2F5Q15329 346 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 TADA2BQ86TJ2 420 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 DHTKD1Q96HY7 919 aaPredicted RBP12.71□□□□□ -0.38
CSRP1-215ENST00000532313 JADE2Q9NQC1 790 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 PCDHB7Q9Y5E2 793 aa12.71□□□□□ -0.38
CSRP1-215ENST00000532313 PARP4Q9UKK3 1724 aaKnown RBP12.7□□□□□ -0.38
CSRP1-215ENST00000532313 RPN1P04843 607 aaKnown RBP12.7□□□□□ -0.38
CSRP1-215ENST00000532313 SEMA3FQ13275 785 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 PFDN6O15212 129 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 TGFB3P10600 412 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 PDHBP11177 359 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 HAUS1Q96CS2 278 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 CCDC175P0C221 793 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 TRIM50Q86XT4 487 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 POLIQ9UNA4 740 aa12.7□□□□□ -0.38
CSRP1-215ENST00000532313 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
CSRP1-215ENST00000532313 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 DNA2P51530 1060 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 VGLL4Q14135 290 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
CSRP1-215ENST00000532313 SPECC1Q5M775 1068 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 SIX6OS1Q8N1H7 587 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 SHCBP1Q8NEM2 672 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
CSRP1-215ENST00000532313 MSRAQ9UJ68 235 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 FAM169AQ9Y6X4 670 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 F8W8V4 182 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 BFSP1Q12934 665 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 TSGA10IPQ3SY00 556 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 KLRK1P26718 216 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 NFIAQ12857 509 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 CYFIP1Q7L576 1253 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 FAM186BQ8IYM0 893 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 WDR18Q9BV38 432 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 BHMT2Q9H2M3 363 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 TMEM39AQ9NV64 488 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 FAM50BQ9Y247 325 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 E7EVH7 732 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 ERVK-9P63128 1117 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 ERVK-24P63145 666 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 SFMBT2Q5VUG0 894 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 GJA10Q969M2 543 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 NFAT5O94916 1531 aa12.69□□□□□ -0.38
CSRP1-215ENST00000532313 PFKFB1P16118 471 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 ZNF667Q5HYK9 610 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 ZNF449Q6P9G9 518 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 CPSF3Q9UKF6 684 aaKnown RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 RNF8O76064 485 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 PEX3P56589 373 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 IQSEC1Q6DN90 963 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 PPP1R9BQ96SB3 815 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 APBA2Q99767 749 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 MAF1Q9H063 256 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 ALDH8A1Q9H2A2 487 aaPredicted RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 SUCLA2Q9P2R7 463 aaPredicted RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 ESYT2A0FGR8 921 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 NMT2O60551 498 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 KRBA2Q6ZNG9 492 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 MAP7D3Q8IWC1 876 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 TIGD1Q96MW7 591 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 TUBB4BP68371 445 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms