RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 LRFN2Q9ULH4 789 aa13.28□□□□□ -0.28
CMTM1-215ENST00000531885 CDY2AQ9Y6F7 541 aa13.28□□□□□ -0.28
CMTM1-215ENST00000531885 USP34Q70CQ2 3546 aa13.27□□□□□ -0.28
CMTM1-215ENST00000531885 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 CYTH3O43739 400 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 DGKIO75912 1065 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 GNAQP50148 359 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 PTPN5P54829 565 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 IGBP1P78318 339 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 MRPS6P82932 125 aaKnown RBP13.27□□□□□ -0.29
CMTM1-215ENST00000531885 DLX2Q07687 328 aaPredicted RBP13.27□□□□□ -0.29
CMTM1-215ENST00000531885 MGAT3Q09327 533 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 PAK2Q13177 524 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 RUFY4Q6ZNE9 571 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 EDAQ92838 391 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 ZNF689Q96CS4 500 aaPredicted RBP13.27□□□□□ -0.29
CMTM1-215ENST00000531885 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 SQORQ9Y6N5 450 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 TTC3P53804 2025 aa13.27□□□□□ -0.29
CMTM1-215ENST00000531885 SPDYE3A6NKU9 549 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 MAFGO15525 162 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 TBX10O75333 385 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 SRGAP2BP0DMP2 458 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 TROAPQ12815 778 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 ADAM15Q13444 863 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 MTMR1Q13613 665 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
CMTM1-215ENST00000531885 USP17L6PQ6QN14 398 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 FAM43BQ6ZT52 329 aaPredicted RBP13.26□□□□□ -0.29
CMTM1-215ENST00000531885 PBXIP1Q96AQ6 731 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 MAP3K14Q99558 947 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
CMTM1-215ENST00000531885 RC3H2Q9HBD1 1191 aaKnown RBP13.26□□□□□ -0.29
CMTM1-215ENST00000531885 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 PLAGL2Q9UPG8 496 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
CMTM1-215ENST00000531885 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
CMTM1-215ENST00000531885 ZNF318Q5VUA4 2279 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 TMEM221A6NGB7 291 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 M0R296 226 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 DDAH1O94760 285 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 EYA4O95677 639 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 CD52P31358 61 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 PAN2Q504Q3 1202 aaKnown RBP13.25□□□□□ -0.29
CMTM1-215ENST00000531885 ODR4Q5SWX8 454 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 NFXL1Q6ZNB6 911 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 BMP8AQ7Z5Y6 402 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 EFHBQ8N7U6 833 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 POF1BQ8WVV4 589 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 PCDHB12Q9Y5F1 795 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 TRPV2Q9Y5S1 764 aa13.25□□□□□ -0.29
CMTM1-215ENST00000531885 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
CMTM1-215ENST00000531885 ATG2AQ2TAZ0 1938 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
CMTM1-215ENST00000531885 LINC01565O15544 149 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 CYP21A2P08686 494 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 SCG2P13521 617 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 KCNA2P16389 499 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 IBSPP21815 317 aaPredicted RBP13.24□□□□□ -0.29
CMTM1-215ENST00000531885 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.29
CMTM1-215ENST00000531885 NRIP1P48552 1158 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 COASYQ13057 564 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 SLC35G1Q2M3R5 365 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 TRIM67Q6ZTA4 783 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 KLHL23Q8NBE8 558 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 SMRP1Q8NCR6 262 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 TLE6Q9H808 572 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 JPH1Q9HDC5 661 aaPredicted RBP13.24□□□□□ -0.29
CMTM1-215ENST00000531885 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
CMTM1-215ENST00000531885 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 E7EWF7 191 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 MEIS2O14770 477 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 ITGB1P05556 798 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 INSRRP14616 1297 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 UBE3AQ05086 875 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
CMTM1-215ENST00000531885 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 TMTC2Q8N394 836 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 NME8Q8N427 588 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 MSLNLQ96KJ4 702 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 CDCA3Q99618 268 aaPredicted RBP13.23□□□□□ -0.29
CMTM1-215ENST00000531885 PHF7Q9BWX1 381 aaPredicted RBP13.23□□□□□ -0.29
CMTM1-215ENST00000531885 SLC9A2Q9UBY0 812 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 PADI3Q9ULW8 664 aa13.23□□□□□ -0.29
CMTM1-215ENST00000531885 IGSF9BQ9UPX0 1349 aa13.22□□□□□ -0.29
CMTM1-215ENST00000531885 GSTTP1A0A1W2PQM5 241 aa13.22□□□□□ -0.29
CMTM1-215ENST00000531885 DENND3A2RUS2 1198 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms