RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 IMPACTQ9P2X3 320 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 IP6K2Q9UHH9 426 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 VAV3Q9UKW4 847 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 SLC5A6Q9Y289 635 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 SCDO00767 359 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 CLASP2O75122 1294 aaKnown RBP3.95□□□□□ -1.78
CD44-234ENST00000531873 PEX14O75381 377 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 ZRANB2O95218 330 aaKnown RBP eCLIP3.95□□□□□ -1.78
CD44-234ENST00000531873 TACR1P25103 407 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 CFPP27918 469 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 BUD31P41223 144 aaPredicted RBP3.95□□□□□ -1.78
CD44-234ENST00000531873 GPR3P46089 330 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 RTP1P59025 263 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 MVKQ03426 396 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 BNIP3Q12983 259 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 DUSP4Q13115 394 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 IKZF1Q13422 519 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 TCIRG1Q13488 830 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 ZNF174Q15697 407 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 ZNF574Q6ZN55 896 aaPredicted RBP3.95□□□□□ -1.78
CD44-234ENST00000531873 LCNL1Q6ZST4 164 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 CEP128Q6ZU80 1094 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 KCTD1Q719H9 257 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 SPRED2Q7Z698 418 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 CMTR2Q8IYT2 770 aaKnown RBP3.95□□□□□ -1.78
CD44-234ENST00000531873 CPA6Q8N4T0 437 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 LZTR1Q8N653 840 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 PMM1Q92871 262 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 SLC39A13Q96H72 371 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 FAXDC2Q96IV6 333 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 SCYL1Q96KG9 808 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 ALPK1Q96QP1 1244 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 ORAI2Q96SN7 254 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 ZDHHC5Q9C0B5 715 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 PCIF1Q9H4Z3 704 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 SP110Q9HB58 689 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 TOMM22Q9NS69 142 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 CCM2LQ9NUG4 571 aaPredicted RBP3.95□□□□□ -1.78
CD44-234ENST00000531873 TMEM59LQ9UK28 342 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 DSEQ9UL01 958 aa3.95□□□□□ -1.78
CD44-234ENST00000531873 COA3Q9Y2R0 106 aaPredicted RBP3.95□□□□□ -1.78
CD44-234ENST00000531873 RASSF10A6NK89 507 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 FAM90A27PA6NNH2 459 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 NRDCO43847 1150 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 KDM1AO60341 852 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 TADA3O75528 432 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 LTFP02788 710 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 NTRK1P04629 796 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 TMEM253P0C7T8 217 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 GLI4P10075 376 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 PF4V1P10720 104 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 CD8BP10966 210 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 FUT4P22083 530 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 LSP1P33241 339 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 SLC6A11P48066 632 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 EPHA5P54756 1037 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 SCAND1P57086 179 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 RHBDL3P58872 404 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 CATSPEREQ5SY80 951 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 CXorf57Q6NSI4 855 aaKnown RBP3.94□□□□□ -1.78
CD44-234ENST00000531873 CC2D1AQ6P1N0 951 aaPredicted RBP3.94□□□□□ -1.78
CD44-234ENST00000531873 TTLL10Q6ZVT0 673 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 RBM12BQ8IXT5 1001 aaKnown RBP3.94□□□□□ -1.78
CD44-234ENST00000531873 ANKS4BQ8N8V4 417 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 MISP3Q96FF7 219 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 C16orf92Q96LL3 132 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 SEMA4AQ9H3S1 761 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 ARNT2Q9HBZ2 717 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 PDLIM7Q9NR12 457 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 KCNH7Q9NS40 1196 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 LMCD1Q9NZU5 365 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 SLAMF8Q9P0V8 285 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 ACSL6Q9UKU0 697 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 ZBTB21Q9ULJ3 1066 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 ATP23Q9Y6H3 246 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 TAF6LQ9Y6J9 622 aa3.94□□□□□ -1.78
CD44-234ENST00000531873 SLC27A2O14975 620 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 TPD52L2O43399 206 aaKnown RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 HIP1RO75146 1068 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 SNUPNO95149 360 aaKnown RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 C4BPAP04003 597 aaKnown RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 PTPN1P18031 435 aaKnown RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 SDHAP31040 664 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 RECQLP46063 649 aaPredicted RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 HTRA3P83110 453 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 ZP2Q05996 745 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 MOGSQ13724 837 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 RGL3Q3MIN7 710 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 TIGD5Q53EQ6 642 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 STEAP3Q658P3 488 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 CYP4F22Q6NT55 531 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 PGM2L1Q6PCE3 622 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 EPM2AIP1Q7L775 607 aaPredicted RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 CCAR1Q8IX12 1150 aaKnown RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 ZSCAN18Q8TBC5 510 aaPredicted RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 RTF1Q92541 710 aaKnown RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 ZNF496Q96IT1 587 aaPredicted RBP3.93□□□□□ -1.78
CD44-234ENST00000531873 PRDM7Q9NQW5 492 aa3.93□□□□□ -1.78
CD44-234ENST00000531873 ANLNQ9NQW6 1124 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 756.1 ms