RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 FBXO47Q5MNV8 452 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 MARCH8Q5T0T0 291 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
USF1-210ENST00000531842 ASCL5Q7RTU5 278 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 BMP8AQ7Z5Y6 402 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 SUGP1Q8IWZ8 645 aaKnown RBP10.39□□□□□ -0.75
USF1-210ENST00000531842 FEZF2Q8TBJ5 459 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 TRAPPC12Q8WVT3 735 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 POF1BQ8WVV4 589 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 APBB2Q92870 758 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 ASIC4Q96FT7 647 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 LNPKQ9C0E8 428 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 FAM49AQ9H0Q0 323 aaPredicted RBP10.39□□□□□ -0.75
USF1-210ENST00000531842 LMAN2LQ9H0V9 348 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 RNF41Q9H4P4 317 aaPredicted RBP10.39□□□□□ -0.75
USF1-210ENST00000531842 TAF6LQ9Y6J9 622 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 GVINP1Q7Z2Y8 2422 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 CACNA1AO00555 2505 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 GCOM1H8Y6P7 765 aaPredicted RBP10.38□□□□□ -0.75
USF1-210ENST00000531842 POLR2MP0CAP2 368 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 SDSP20132 328 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 AVPR2P30518 371 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 ERVFC1P60507 584 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 APOBRQ0VD83 1088 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 SEC23AQ15436 765 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 KCNV1Q6PIU1 500 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 USP17L6PQ6QN14 398 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 METTL7BQ6UX53 244 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 IQCA1Q86XH1 822 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 ATOH1Q92858 354 aaPredicted RBP10.38□□□□□ -0.75
USF1-210ENST00000531842 INPP4AQ96PE3 977 aaPredicted RBP10.38□□□□□ -0.75
USF1-210ENST00000531842 USP26Q9BXU7 913 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 DMXL1Q9Y485 3027 aa10.38□□□□□ -0.75
USF1-210ENST00000531842 GSTTP1A0A1W2PQM5 241 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 PALM3A6NDB9 673 aaPredicted RBP10.37□□□□□ -0.75
USF1-210ENST00000531842 NCK2O43639 380 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 TGFB3P10600 412 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 ICAM3P32942 547 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 TCF7P36402 384 aaPredicted RBP10.37□□□□□ -0.75
USF1-210ENST00000531842 COASYQ13057 564 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 PPFIA1Q13136 1202 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
USF1-210ENST00000531842 GRIK4Q16099 956 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 IFIT1BQ5T764 474 aaKnown RBP10.37□□□□□ -0.75
USF1-210ENST00000531842 B4GALNT3Q6L9W6 998 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 LLGL2Q6P1M3 1020 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 TMX1Q9H3N1 280 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 ZNF292O60281 2723 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 DNAH14Q0VDD8 3507 aa10.37□□□□□ -0.75
USF1-210ENST00000531842 MGEA5O60502 916 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 CAND2O75155 1236 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 WEE2P0C1S8 567 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 MRPS6P82932 125 aaKnown RBP10.36□□□□□ -0.75
USF1-210ENST00000531842 SIGLEC14Q08ET2 396 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 KANK3Q6NY19 840 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 TSHZ1Q6ZSZ6 1077 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 MICAL1Q8TDZ2 1067 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 PPP1R16BQ96T49 567 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 PCYT2Q99447 389 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 UBAC1Q9BSL1 405 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 MYL10Q9BUA6 226 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 PHF7Q9BWX1 381 aaPredicted RBP10.36□□□□□ -0.75
USF1-210ENST00000531842 TLE6Q9H808 572 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 TUBE1Q9UJT0 475 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 PADI3Q9ULW8 664 aa10.36□□□□□ -0.75
USF1-210ENST00000531842 EP300Q09472 2414 aaPredicted RBP10.36□□□□□ -0.75
USF1-210ENST00000531842 FRMPD4Q14CM0 1322 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 NRCAMQ92823 1304 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 WDR81Q562E7 1941 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 FRYLO94915 3013 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 hCG_1642624A0A1W2PR95 340 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 FIBPO43427 364 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 GNAT1P11488 350 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 PCP11498 1178 aaKnown RBP10.35□□□□□ -0.75
USF1-210ENST00000531842 KCNA2P16389 499 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 PBX3P40426 434 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
USF1-210ENST00000531842 NEDD9Q14511 834 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 GRM4Q14833 912 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 FAM102BQ5T8I3 360 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 PLPP4Q5VZY2 271 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 TMEM105Q8N8V8 129 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 P2RX5Q93086 422 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 PLVAPQ9BX97 442 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 MAF1Q9H063 256 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 RIOX1Q9H6W3 641 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 TSHZ2Q9NRE2 1034 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 ZNF215Q9UL58 517 aaPredicted RBP10.35□□□□□ -0.75
USF1-210ENST00000531842 RWDD3Q9Y3V2 267 aa10.35□□□□□ -0.75
USF1-210ENST00000531842 INSRRP14616 1297 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 UBE2SQ16763 222 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 PTPN21Q16825 1174 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 GNPTABQ3T906 1256 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 SPOUT1Q5T280 376 aaKnown RBP10.34□□□□□ -0.75
USF1-210ENST00000531842 SYCE2Q6PIF2 218 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 NPAS4Q8IUM7 802 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 CMTR2Q8IYT2 770 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms